Candidatus Nitrosopumilus sediminis: NSED_01425
Help
Entry
NSED_01425 CDS
T02303
Name
(GenBank) ATPase RIL
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nir03009
]
NSED_01425
Ribosome biogenesis [BR:
nir03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
NSED_01425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
Fer4_6
Fer4
SMC_N
Fer4_21
Fer4_7
Fer4_2
Fer4_10
LdpA_Fe-S-bd
RsgA_GTPase
Fer4_3
Fer4_9
Fer4_16
MMR_HSR1
Fer4_4
AAA_29
RE_XcyI
Rad17
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AFS82097
UniProt:
K0BAH3
LinkDB
All DBs
Position
complement(238166..239953)
Genome browser
AA seq
595 aa
AA seq
DB search
MTHRVAVLDQDLCQPQKCGLECIKYCPVNKSGAECVTINEESKKAQIDEDICNGCGICVK
VCPFDAITIVNLASELATDKIHQYGMNSFRLYKLPTPKKGEVVGLLGRNGMGKSTVVNIL
SGNLKPNLGRYDNPPEWDEILKHYSGTELKQHFEKIEQKQIRASIKPQQVHHIAQAFDGT
GKELLDKYDERGVSRELIKELGLENSMEQSLKELSGGELQRIAVAAAASKDTEFYFFDEP
SSYNDVFQRTGVARVIQNLAKIGKSVMVVEHDLTLLDFLSDYIEVLYGEPTAYGIVSSIL
STKVGINVFLDGYLPNENVRFRDKKFSFDVSSSVTDIFQEGSDILTYPKLEKKYPSFSVT
IEPGRVRKGEVLGIMGANALGKTTMMKMIAGVEKPDVGHIDKKLKIAYKPQYLQNDLDVE
VISVLDKANENPVEGSMEEEQILDPLKIKKLYNKSIKNLSGGELQKVAVASCLLQKVDLY
ALDEPSAFLDVEDRIAVAKFLQKFVRSFGKSAIIIDHDLQLMDLISDSMIIFEGESGSAG
IATSPMPKAEAMNRFLKSLDMSFRRDEKSLRPRVNKLESRLDKDQKSTGNFYYKH
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgactcatagagtagcagttttagatcaggatctatgtcagccacaaaaatgtggttta
gaatgtataaaatattgcccagtcaacaaatcaggcgcagaatgtgtcactattaacgaa
gaatcaaagaaagctcaaattgatgaggatatttgtaatggatgcggaatttgtgtcaaa
gtatgcccatttgatgcaataacaattgtcaacctagcaagcgaactagctacggacaaa
attcatcagtatggaatgaattcatttcgactttacaaattacccacaccaaagaaggga
gaagttgttggattattaggtagaaatgggatgggaaaaagtacggtagtcaacatacta
tcaggaaatcttaaaccaaatttgggaagatatgataacccacctgaatgggatgaaatt
ttaaaacattacagtggaacagaactcaaacaacattttgaaaaaattgaacaaaaacaa
atcagagcatcaataaaaccacagcaagttcatcatattgctcaggcatttgatggaact
ggaaaagaactcctcgacaaatatgatgaacgcggagtatcaagagaactgatcaaagaa
ttaggattagagaactctatggaacagagtttaaaggaattaagtggtggagaattacaa
agaattgcagttgcagctgcggcatcaaaagatacagagttttacttttttgatgaacca
tcatcgtataatgatgtatttcaaagaacaggtgttgcgcgagtaatacaaaatttggca
aaaattgggaaaagtgtaatggtagtagaacatgatttaacattactagattttctaagt
gattatatcgaagtgttgtatggagaacctacagcatatggaattgtctcaagtattcta
tctacaaaagttggaatcaatgttttccttgatggatatttaccaaatgaaaatgtaaga
tttagggataaaaaattctcttttgatgtatcatcttcagttacagatatttttcaagaa
ggtagtgatattctcacatatcctaaactggagaaaaaatatccttcattttcagtaaca
attgagcctggaagagtaagaaaaggagaagttttaggaattatgggagctaatgcgctt
ggtaaaacaactatgatgaaaatgattgcaggggttgaaaagccagatgtaggtcatatt
gataaaaaattaaagattgcatacaaaccacaatatcttcaaaacgatcttgatgtggaa
gtcatatcagttctagataaagcaaatgaaaatccagttgaaggtagtatggaagaagaa
caaattctagatccattaaaaatcaaaaaactgtataataaatcaatcaagaatctttct
ggaggagaactgcaaaaagtagccgttgcatcatgcctattgcaaaaagttgatttgtat
gcactagatgaaccatcagcatttttggatgtagaagatagaattgcagttgcaaaattt
ttacaaaaatttgttcgttcttttggaaaatcagcgataatcattgatcatgatttacaa
ctgatggatctaatttcagattcaatgataatatttgagggagaatcaggatctgcagga
attgctacatcacctatgccaaaagcagaagccatgaatagatttctaaaatcacttgac
atgtcatttagaagagatgaaaaaagtctaagaccccgtgtaaataaattagaaagcagg
ttagataaagatcaaaaatcaactggaaacttctattacaagcattga
DBGET
integrated database retrieval system
