Candidatus Nitrosopumilus sediminis: NSED_01445
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Entry
NSED_01445 CDS
T02303
Name
(GenBank) ribulose-phosphate 3-epimerase
KO
K00615
transketolase [EC:
2.2.1.1
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00030
Pentose phosphate pathway
nir00710
Carbon fixation by Calvin cycle
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01120
Microbial metabolism in diverse environments
nir01200
Carbon metabolism
nir01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
NSED_01445
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
NSED_01445
09109 Metabolism of terpenoids and polyketides
01051 Biosynthesis of ansamycins
NSED_01445
Enzymes [BR:
nir01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.1 transketolase
NSED_01445
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Gene cluster
GFIT
Motif
Pfam:
Ribul_P_3_epim
Transketolase_N
DXP_synthase_N
E1_dh
XFP_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
AFS82101
UniProt:
K0BCJ9
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Position
243048..244607
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AA seq
519 aa
AA seq
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MAEILGCLFNKYLKFDPKNPQWEDRDRLVLSKGHAAPGLFSNMSVAGYFPESEIETLRKF
GSKLQGHPDLKCPGIEFCGGSLGTGLSYSIGIALAAKIDSKSHHVYTIIGDGESDEGQVW
EAAMTASKYKVDNLTAFLDRNFLQQDSYTEKVMPLDEKLEGDNISEMWKDASRWKTGDKW
RSFGWNVIEIDGHRIEQINAAIAKANVTKGVPTIIISRTIKGKSIEHMEDNPQWHGKAPD
SDVVPMINLELDSQFMISPSIIAGDMTNLENEIKRCVSGRADYIHLDVMDGQFVPTKTFD
HNKIKELRPLTVIPFDTHLMINEPVKYVKDYIDAGSDIITVHAEVTDESSFGEIHDLLKQ
NQVGVGFSINPDTELPEWSYKFLESLDQLIVMSVVPGKSGQKYIEETHAKMSRLNSVLKE
HNFTGYIEADGGVNLENIGSIFADGARVFVGGGAIIGQQDVRAAIRDFRTEVLKSRRRNL
LDKANELGGTELVNKWIGLHVIGEKQDQIKKIAQEAGYL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaattttaggttgtttgttcaacaaatatctaaaatttgatcctaaaaatcca
caatgggaagatagagatcgtttagttttatcaaaaggacatgctgctcctggactattt
tctaatatgtcagttgcaggatattttccagagtctgaaattgaaactttacgtaaattt
ggaagtaaattacaaggacatccagatctcaagtgtcctgggatagagttctgtggtggt
tctttaggtactggattatcatattctatagggattgcacttgctgcaaaaattgattct
aaaagtcaccatgtctataccatcattggagatggggagtctgatgaaggacaagtttgg
gaggctgcaatgactgcttcaaaatacaaagttgataatctgactgcttttcttgataga
aatttccttcaacaagactcgtacactgaaaaagtcatgcctcttgatgaaaaattggaa
ggtgataatatttctgaaatgtggaaagatgcgtcgcgttggaaaaccggggataaatgg
agatcatttggttggaatgtaattgaaattgacggacatcgtatagaacaaattaatgca
gcaattgcaaaagcaaatgtcacaaaaggcgttcctacaataataatttctagaactatc
aagggaaaatctatagagcacatggaagacaatccacaatggcatgggaaagctcctgat
tctgatgttgtccctatgattaatcttgaattggattcacagttcatgatttcaccatca
attattgcaggagatatgacaaatttagaaaatgaaattaaacgatgtgtgtctggtagg
gcagattacattcatcttgatgtaatggatggacagtttgtaccgacaaaaactttcgat
cataacaaaatcaaagaactaagaccattaacagtaattccttttgacactcacttgatg
ataaatgaacctgtaaaatatgttaaagactatatcgatgcgggcagtgacattatcact
gttcatgcagaagttactgatgaatctagttttggagaaattcatgatttgttaaaacaa
aatcaagttggtgtaggattctcaataaatccagacactgaactacctgaatggtcttac
aaatttttagaatcacttgatcagttaattgtaatgtctgtagtacctggaaaatctggt
caaaaatacattgaagagacacatgctaaaatgtctagattgaactctgttctaaaagaa
cataattttacaggctatattgaggctgacgggggtgtaaatcttgaaaatattggttct
atatttgcagatggtgcacgggtttttgttggaggtggtgctattattggacaacaagat
gttcgagctgccattagagattttagaactgaggtgttaaaatctagaagacgaaattta
cttgataaagcaaatgaattaggtgggaccgaattggtaaacaaatggattggcctacac
gtaattggagaaaaacaagatcaaattaaaaaaattgcacaggaggcagggtatctttga
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