Candidatus Nitrosopumilus sediminis: NSED_01505
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Entry
NSED_01505 CDS
T02303
Name
(GenBank) polyprenyl synthetase
KO
K13787
geranylgeranyl diphosphate synthase, type I [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00900
Terpenoid backbone biosynthesis
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
Module
nir_M00365
C10-C20 isoprenoid biosynthesis, archaea
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
NSED_01505
09110 Biosynthesis of other secondary metabolites
00997 Biosynthesis of various other secondary metabolites
NSED_01505
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
nir01006
]
NSED_01505
Enzymes [BR:
nir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
NSED_01505
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
NSED_01505
2.5.1.29 geranylgeranyl diphosphate synthase
NSED_01505
Prenyltransferases [BR:
nir01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
NSED_01505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Terpene_synth_C
Terpene_syn_C_2
Motif
Other DBs
NCBI-ProteinID:
AFS82113
UniProt:
K0B7H2
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All DBs
Position
complement(253229..254209)
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AA seq
326 aa
AA seq
DB search
MKKTKQIEQNAKIVNKYLNSKLKGNPKKLYDAAGHLIVNGGKRLRPYMVIRSCQILHGKI
SDAMPAASAVEMVHNFSLVHDDIMDNDDMRHGVPTVHKKFGMPIAILAGDVLFSKAFQVI
TDSKLPSSATTQLVSRLSKACVDICEGQLLDVKMAEEKKIPSQAEYITMIGKKTAALFDV
SCAMGAICATNKPKDISNLSSFGRNLGIAFQITDDLIGVMGDPKITKKPVGNDLREGKKS
LPILMAIKLAKGKDKKIILKAFGNSKVARTDLNKAVQVIRSLGIEQNVRKQALKYAEKAE
KSLVKYSSPAKIELISLLDFVVKRSV
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagactaaacagattgaacaaaatgcaaaaatagtaaacaagtatctaaactca
aaattaaaaggaaatccaaaaaaactctatgatgcagccggacatcttattgtgaatgga
gggaaaagacttagaccatacatggtaattagaagctgccaaattttacatggcaaaatc
tccgatgcaatgccagctgcaagtgcagtagaaatggtacataatttctcattagttcat
gatgacattatggataatgatgatatgcgtcatggagttccaacagttcataaaaaattt
ggtatgccaattgcaattcttgcaggggatgtattattttcaaaagcatttcaagtaatt
actgattcaaaattaccatcaagtgcaaccacgcaacttgtttctagactttccaaagct
tgtgtagacatatgtgaagggcaattacttgatgtaaaaatggcagaagaaaagaaaatt
ccttcacaagcagaatacatcacaatgataggtaaaaaaacagccgcactgtttgatgtg
tcatgtgcaatgggggcaatatgtgcaacaaataaaccaaaagatatttcaaatctttca
tcatttggaagaaacttaggaattgcatttcagattactgatgatcttattggtgtaatg
ggagatcctaaaattacaaagaagccagtaggtaatgatctaagagaaggtaaaaaatca
cttccaattttaatggcaattaaattagcaaaagggaaggacaagaaaattattttgaaa
gcatttggaaattcaaaagttgcaagaacagatctcaataaagctgtacaggtcataaga
tccttagggattgaacaaaatgtgagaaaacaggctctaaaatacgcagaaaaagccgag
aaatcactagtaaaatattcaagccctgccaaaatagaattaatttcattactagatttt
gtagttaaaagaagtgtatag
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