KEGG   Candidatus Nitrosopumilus sediminis: NSED_01665
Entry
NSED_01665        CDS       T02303                                 
Name
(GenBank) RNA polymerase Rpb5
  KO
K03053  DNA-directed RNA polymerase subunit H [EC:2.7.7.6]
Organism
nir  Candidatus Nitrosopumilus sediminis
Pathway
nir03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NSED_01665
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nir03021]
    NSED_01665
Enzymes [BR:nir01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NSED_01665
Transcription machinery [BR:nir03021]
 Prokaryotic type
  Archaeal type
   RNA polymerase
    Core subunits
     NSED_01665
SSDB
Motif
Pfam: RNA_pol_Rpb5_C
Other DBs
NCBI-ProteinID: AFS82145
UniProt: K0BAX8
LinkDB
Position
284777..285028
AA seq 83 aa
MATKKNQVLVPDHVYVPKHEIISKQEAEEVLKKYNCKPTELPLIFVNDPAILGLGVKPGD
MIKITRKSPTAGESLYYRYVVEI
NT seq 252 nt   +upstreamnt  +downstreamnt
atggcaactaagaaaaatcaagttttagtccctgatcatgtttatgttccaaaacatgaa
ataatttctaaacaagaagctgaagaagttttaaaaaaatacaattgtaaaccaactgaa
ttaccattaatctttgtaaatgatcctgcaattttgggacttggtgtaaagcctggagat
atgattaagattactcgaaaaagtccaactgcaggtgaaagtctctattatagatatgtg
gtggaaatctaa

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