Candidatus Nitrosopumilus sediminis: NSED_02195
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Entry
NSED_02195 CDS
T02303
Name
(GenBank) 3-isopropylmalate dehydratase large subunit
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00290
Valine, leucine and isoleucine biosynthesis
nir00660
C5-Branched dibasic acid metabolism
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01210
2-Oxocarboxylic acid metabolism
nir01230
Biosynthesis of amino acids
Module
nir_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
NSED_02195
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
NSED_02195
Enzymes [BR:
nir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
NSED_02195
4.2.1.35 (R)-2-methylmalate dehydratase
NSED_02195
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GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
AFS82249
UniProt:
K0B9S2
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All DBs
Position
372378..373793
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AA seq
471 aa
AA seq
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MGKTLFEKIWESHIVVEKENNPSLIYIDRHLVHEVTSPQAFDGLRMNNRKVRRPDLTIAT
MDHNVPTTDRSLPILDQTSSIQIKTLEKNCKDFGIKLFDINSPNQGIVHVIGPQLGITLP
GTTIVCGDSHTSTHGAFGALALGIGTSDVEHVLASQTMWLEKPKPFEIRVEGKRKNPHAV
TAKDIVLSIIKNIGTGGGTGTVIEYRGEGISDLSMEQRMTICNMSIEAGARAGLIAPDEK
TFDYLRGREYTPKNYESLVDSWRDNLKTDSDATFEKQFTLHIDDIAPQVSWGTNPGMTSD
VTESIPSPDEFSKGDPNQKKGAEKALDYMDLEPGTPIEDIKIDRVFIGSCTNARLEDLIE
ASKVIKGQKISPSVKAMVVPGSQMVKKQAEEMGLDKIFIDANFEWREAGCSMCLGMNPDI
LSPGERCASTSNRNFEGRQGTGGRTHLVSPVMAAAAAIKGHFVDVRKMDLN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaactctttttgaaaaaatttgggaatcacacattgttgttgaaaaagaaaat
aatccatccctgatttacattgaccgacatcttgttcatgaagtaacttctccacaagcc
tttgatgggttgcgcatgaataatagaaaagtcagacgacctgatcttactattgctacg
atggatcataatgttccgacaacagaccgctcactcccaattttagatcaaacatcatct
atacaaatcaaaaccttggaaaaaaactgtaaagattttggaattaaactatttgatatt
aacagtcctaatcaaggaatagttcatgtgataggtcctcaattgggaatcactttacct
ggtactactattgtatgtggtgacagccacacatcaacacatggagcatttggagctctt
gcattgggtattggtactagtgatgttgagcatgtacttgcatctcaaacaatgtggcta
gaaaaaccaaaaccttttgaaatccgagttgaaggaaaaagaaaaaaccctcatgccgtg
actgccaaagatatagttctctcaattatcaaaaatataggaacaggaggtggtacaggc
acagtaattgaatatcgtggtgaaggaattagtgatctttcgatggagcaaagaatgact
atttgcaatatgtccattgaagcaggtgctcgtgcaggtttgatagctcctgatgaaaaa
acttttgattatttgaggggtagagaatacactccaaaaaactatgaatccctagttgat
tcttggagagacaatctcaagacagacagtgatgcgacatttgaaaaacaatttacttta
cacattgatgatattgcacctcaagtaagctggggaacaaatcctggcatgacatctgat
gtgactgaatctattccatcacctgatgaattctccaagggtgatccaaatcaaaagaag
ggagctgaaaaagcacttgattacatggatttagaacctggcactccaatcgaagatatc
aaaatcgatagagtgtttattggttcatgcactaacgcaagattagaagatcttattgag
gcatcaaaagtaatcaagggacagaaaatctcgccttctgtaaaagctatggttgtacct
ggttctcaaatggtgaaaaaacaagctgaagaaatgggattggataaaattttcattgat
gctaattttgaatggcgtgaagctggatgtagtatgtgtcttggaatgaaccctgatatc
ttatctccaggtgagcgttgtgcaagtacatctaatagaaactttgaaggaagacaagga
actggtggcagaactcatttggttagtcctgtaatggctgcagcagctgcaatcaaagga
cattttgtagatgttaggaaaatggatttgaattaa
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