Candidatus Nitrosopumilus sediminis: NSED_02235
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Entry
NSED_02235 CDS
T02303
Name
(GenBank) RNA-associated protein
KO
K14574
ribosome maturation protein SDO1
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
NSED_02235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nir03009
]
NSED_02235
Ribosome biogenesis [BR:
nir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
NSED_02235
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
EFG_C
Motif
Other DBs
NCBI-ProteinID:
AFS82257
UniProt:
K0BAZ6
LinkDB
All DBs
Position
377615..378301
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AA seq
228 aa
AA seq
DB search
MADYTLVRYSFEGEKFEIMVKPDPALDYRLGKKKDISSILVSDEIYTDASKGTRPTAEKL
QHAFKTEDPAEIAEIILKKGDLNLTTDQRRKMIEEKKKQIITFIAKTYVDPKTHLPHPPL
RIEQAMKDGRVSIDPHKAVDEQVKDIVEKLRSIIALKSETLKLEITIPAQFASQSYAVLK
SVGSLNREEWQNNGSLKAILEIPAAARPNVIDRLGSITKGSATVEVVQ
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggccgattacacactagtgcgatattcatttgaaggggaaaaatttgagattatggta
aagcctgatcctgcacttgattatcgtttgggtaagaaaaaggatatttcatcaatctta
gtatctgatgaaatttacaccgatgcaagtaaaggaacaagacctacagctgaaaaatta
caacatgctttcaaaactgaagaccctgcagaaattgcagagatcattctaaagaaaggt
gatctaaatttaacaactgatcaaaggcgaaaaatgattgaagagaagaaaaaacagatt
atcacatttattgcaaaaacatacgtggatcctaaaacccatcttccacatccgccactt
agaattgagcaggctatgaaagatggtagagtttcaatcgatcctcacaaagcagtagat
gagcaagtaaaggacattgttgaaaaattgcgttctatcattgctttgaaatctgagact
ctgaaattagaaattacaattcctgcacagtttgcatctcaatcatatgctgttctaaaa
tctgtgggatcactaaacagagaagaatggcaaaataatggttcactaaaagcaatactt
gaaatacccgctgcagcaaggccaaatgtgatagatagattaggttctataacaaagggc
tctgccacagttgaggtagttcaataa
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