| Entry |
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| Name |
(GenBank) exosome complex RNA-binding protein Rrp4
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| KO |
| K03679 | exosome complex component RRP4 |
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| Organism |
nir Candidatus Nitrosopumilus sediminis
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:nir00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NSED_02240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:nir03019]
NSED_02240
Messenger RNA biogenesis [BR:nir03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NSED_02240
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
NSED_02240
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
378301..378984
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| AA seq |
227 aa
MDNKRKYVIPGDVVTTGPFRPEQNVILEGDKIISTTIGISEIYDDSVKVIPLTGKYIPKI
NDLVIGKVISHSSLSWELDINSCYVGFLPAQDVFGRDFSAHADELTSKLKSGDLVAARIA
NFDRTRDPLVTISDRDLGKIDSGDLVKISPSKVPRLIGKRGSMIQMIEMATNAAVTIGQN
GWVVVSCETPEGLLKAKKAIEMINEKAHVANLTDQVKEMLEIKDDES |
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| NT seq |
684 nt +upstreamnt +downstreamnt
atggataataagagaaaatacgttattccaggcgatgtggtgactaccggaccatttaga
cctgaacaaaatgtaatcttagaaggggataaaataatctctacaactattggcatttcc
gaaatttatgatgattctgttaaagttatcccattaactggaaaatacattccaaaaatt
aatgatcttgtgattggaaaagtaatttctcattcttcattatcttgggaattggatatc
aattcatgttatgttggattcttgcctgctcaggatgtatttggacgagacttttcagct
catgcagatgaactgacctccaaactaaaatctggcgatttggtagctgcaagaatagct
aattttgatagaacaagagatccactagtaacgatttctgatagggatttgggtaaaatt
gattctggcgacttggtgaaaatctctcctagtaaagttccaagacttattggaaagaga
ggtagcatgattcagatgatcgaaatggcaactaatgctgctgtgaccatcggtcagaat
ggatgggtagtagtttcatgtgagacgcccgagggattattaaaggctaaaaaggcaatt
gaaatgattaatgaaaaagcacatgttgctaatttgactgatcaagtgaaagaaatgtta
gaaataaaggatgatgaatcataa |
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