Candidatus Nitrosopumilus sediminis: NSED_02555
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Entry
NSED_02555 CDS
T02303
Name
(GenBank) delta-aminolevulinic acid dehydratase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00860
Porphyrin metabolism
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01120
Microbial metabolism in diverse environments
nir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NSED_02555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nir04147
]
NSED_02555
Enzymes [BR:
nir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
NSED_02555
Exosome [BR:
nir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
NSED_02555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
AFS82319
UniProt:
K0BA08
LinkDB
All DBs
Position
complement(429631..430611)
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AA seq
326 aa
AA seq
DB search
MSFPTRRLRRLRTSEKMRELVQETTLSPKDFICPVFVQEDLDERVKVESMSEIERLSLKD
VNDEVSTIIDLGIPAIMLFGIPTQKDEAGSSAFDNNGIVQKAISQIREKFGDKIVIMADV
CLCQFTSTGHCGIIQGNKIDNDISLETLAKIAVSQAKAGVDTVSPSAMMDGQVAAIRKAL
DDEGFTDVSIMSHSAKHRSNFYSPFRDAAECAPKFGDRKTYQVPFTNAREAMMEVETDIE
EGVDIVMIKPALSYLDLIAETRRKYNIPVSAYSVSGEYALVKAASQLGYVNEKDITLEIL
HSIKRAGADMIVTYFAKSASRFLQES
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttcctaccagacgtcttcgtcgactgagaacatctgaaaaaatgagagaattg
gttcaggaaacaactctgtctccgaaggatttcatttgcccagtatttgttcaagaggat
ttggatgaaagagtcaaggtagaatcaatgtcagaaattgagagattgtcattaaaggat
gtaaacgatgaagtaagtacaattattgatttaggaattcctgcaatcatgctttttgga
attccaactcaaaaagatgaagcaggaagttcagcttttgacaataatggaattgttcaa
aaagcaatttcacagataagagaaaaattcggagacaaaatagtaatcatggcagacgtt
tgtctatgccaattcacatccacaggacactgtggaataattcaagggaataaaattgat
aacgacattagtttggaaacacttgcaaaaattgcagtcagtcaagcaaaggcaggagtt
gacacagtatcaccatcagccatgatggacggacaagttgcagccatacgaaaagcactt
gatgatgagggatttacagatgtttcaataatgtcacattctgcaaaacatcgttcaaac
ttttactcaccatttagggatgctgctgaatgtgctccaaagtttggagatagaaagaca
taccaagttccatttacaaatgcaagagaagcaatgatggaagttgagacagatattgaa
gaaggggttgacattgtaatgataaaacctgcattatcatatttggatttaattgccgag
actagaagaaaatacaatattccagtttcagcttatagtgtatctggagaatatgctcta
gtaaaagctgcatctcaattaggatatgttaatgagaaagacatcacattagaaattcta
cattcaatcaaaagagcaggagcagatatgattgtgacatattttgcaaaatcagcttca
agattccttcaagaatcatga
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