Candidatus Nitrosopumilus sediminis: NSED_02570
Help
Entry
NSED_02570 CDS
T02303
Name
(GenBank) AsnC family transcriptional regulator
KO
K22225
siroheme decarboxylase [EC:
4.1.1.111
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00860
Porphyrin metabolism
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
NSED_02570
Enzymes [BR:
nir01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.111 siroheme decarboxylase
NSED_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AsnC_trans_reg2
NirdL-like_HTH
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AFS82322
UniProt:
K0BB58
LinkDB
All DBs
Position
432627..433676
Genome browser
AA seq
349 aa
AA seq
DB search
MNGQILELLTSMDDSDKELLNEIQWTFPLVTRPFDAIAKKFDTTPEDIKNRLNQLKEIGV
LRQLSAIFDTRKLGYTSSLVAMEIEDDKLEYVANQINRHPGVSHNYERDHQFNLWFTLAV
PPGADLKEELEKFNILKGIKKVRMLPTLQLFKIGVKLDMVDDKKHDVAPSEEKKEIKNVK
FVPTEVDKDFIRELQKDMEIIDEPFVKAANNLGITESELFEKMKYYEDIGVMRRFAAILR
HRQVGFTANGMIVWKVPEDRIAKVGETLGSFPQVSHCYERPTYSDWPYNVFSMIHCKTHD
EAHEMAKTIQEQIHVDEYQILFSSREFKKTRVEYFVENSFSLEEAISAS
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
ttgaatgggcagattcttgaattattgacttctatggatgactctgataaagaacttcta
aatgagattcaatggacttttccacttgtaacaagaccatttgatgccattgctaaaaaa
tttgataccactcctgaagacattaaaaatagattaaaccaacttaaagaaattggagtt
ttaagacaactaagtgcaattttcgacacaagaaaacttggctatactagttcacttgtg
gctatggaaattgaagatgataaattagaatatgttgctaatcaaatcaatcgtcatcct
ggtgttagtcataattatgaaagagatcaccagttcaatctctggtttactttggctgtt
cctcctggtgctgatttgaaagaggagcttgaaaaattcaatattttaaagggcattaaa
aaagtaagaatgcttcccactttgcaattattcaaaattggtgttaaacttgacatggta
gatgacaagaagcatgatgttgcaccaagtgaagagaaaaaagaaattaaaaatgttaaa
tttgttccaactgaagtagacaaagactttatccgggaactacaaaaagatatggaaatt
attgatgagccttttgtaaaggctgcaaataatcttggaattactgaaagtgaattgttt
gaaaaaatgaaatattacgaagatattggcgttatgagaagatttgcagctatcttgaga
catagacaagttggctttacagctaatggaatgattgtgtggaaagtacctgaagataga
attgcaaaagttggtgaaactcttggctcatttcctcaagtaagccattgctatgaacga
ccaacatattctgattggccttacaatgtgttttcaatgattcactgcaaaacacacgat
gaggcacatgaaatggcaaaaaccattcaagaacaaatccacgttgatgaataccaaatt
ctattcagttctcgtgaattcaaaaaaactagagtagaatattttgtagaaaattctttt
agcttagaagaagcaatttctgcctcttag
DBGET
integrated database retrieval system
