KEGG   Candidatus Nitrosopumilus sediminis: NSED_02675
Entry
NSED_02675        CDS       T02303                                 
Name
(GenBank) GTP-binding signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
nir  Candidatus Nitrosopumilus sediminis
Pathway
nir02024  Quorum sensing
nir03060  Protein export
nir03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:nir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    NSED_02675
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    NSED_02675
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    NSED_02675
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:nir02044]
    NSED_02675
Enzymes [BR:nir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     NSED_02675
Secretion system [BR:nir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   NSED_02675
  Eukaryotic Sec-SRP protein
   NSED_02675
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA MeaB AAA_22 nSTAND3 ParA MobB AAA_17 APS_kinase Zeta_toxin cobW KTI12 PduV-EutP AAA_18 AAA_31 AAA AAA_33 TssR_C 6PF2K NTPase_1 AAA_30 AAA_16 IstB_IS21 MMR_HSR1 Thymidylate_kin AAA_5 MipZ ABC_tran AAA_24 LpxK ATP_bind_1 Fer4_NifH CLP1_P G-alpha NPHP3_N Arf AAA_28 ResIII SpoVIF VirC1 LytR_C SRPRB NACHT AAA_25
Other DBs
NCBI-ProteinID: AFS82343
UniProt: K0B890
LinkDB
Position
446207..447532
AA seq 441 aa
MLDGLKNSLGDAIKKIVKSSGIDEELIKELSKDVQRALLQSDVNVRLVLEITKHLEERAL
NETPPPGLSRKDHIVKILYDELSKLLGNESEFDFKPGKQNKIILLGIQGSGKTTVASKLA
KFLTRQGYKVGVVGADTYRPGALVQLKTMCEKSNVEVYGEENNKDSPSIVKNGLKHFAGQ
PLDVILIDTAGRHKEEKDLLEEMDRINKVADPDLALLVIDGTIGQQCFNQAEAFHKTIPV
GGVIITKLDSSAKGGGALAASAATGAQIMYIGTGERIDDLEKFSPTRFVGRLLGMGDIQA
VLDLAKRLENEGDDVRMKRISSGKMNMDDFFYQLEEVTKVGSLQGLLDSMPGLSGMVKGD
QVNQMEGRVSKWRYIIQSMTKAEKADPDLLNSSRIKRISRGSGWPEGEVKELIKNYKNSK
NMMKASKGRQMQGTLRKMGLG
NT seq 1326 nt   +upstreamnt  +downstreamnt
atgcttgatggtttgaagaatagtttgggtgacgcaatcaaaaaaattgtaaaatcctct
ggaatagatgaagaactcatcaaagaactttctaaagacgtccaaagagcattacttcaa
tctgatgtaaacgtacgactagtccttgaaatcacaaaacatcttgaggagcgggcactc
aatgaaactcctcctcctggactttcacgaaaggaccatattgtaaaaatcctatacgat
gaactctctaaactacttgggaatgaatctgaatttgactttaaacctggaaaacaaaat
aagatcatcttacttggaattcaaggtagtggcaaaactactgtagcgtcaaaacttgct
aaatttttaacgcgacagggatacaaagtaggtgttgtaggagctgatacatacagacct
ggagcattagtccaactcaaaacgatgtgtgaaaaatctaacgtcgaagtgtatggtgaa
gaaaataacaaagattctcctagtattgtcaaaaatggactaaaacattttgcaggacaa
cctttagatgtaattctaattgatactgctggtcgtcataaagaagagaaggacttgctt
gaagaaatggataggattaacaaagtagcagatcctgacttggctttacttgtaattgat
ggtacaattggacaacaatgtttcaatcaggctgaagcatttcataaaacaattccagta
ggtggtgtaataattacaaaattagacagctctgctaaaggtggtggtgcacttgcagct
tctgcagctactggtgcacaaataatgtacattggaacaggagaacgaattgatgattta
gaaaaattctctcctactagatttgttggacgattgcttggtatgggtgatattcaagcc
gtattggatttagctaaacgattagaaaacgagggagatgatgttagaatgaaaagaatc
tctagtggaaaaatgaatatggatgatttcttttatcaattagaggaagtcactaaagtt
ggttctttacaaggacttcttgatagcatgccagggctttctggaatggtaaaaggtgat
caagtgaatcagatggaaggtagggtttcaaaatggcgttacattatccaaagtatgact
aaagcagaaaaagcagatcctgatttattaaattcgtctagaatcaaaagaatttcccgt
ggctctggatggcctgaaggtgaagtcaaagaattgattaaaaattataaaaattctaag
aatatgatgaaagcctctaaaggtcgtcagatgcaaggcactcttaggaaaatgggatta
ggataa

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