Candidatus Nitrosopumilus sediminis: NSED_04840
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Entry
NSED_04840 CDS
T02303
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00010
Glycolysis / Gluconeogenesis
nir00620
Pyruvate metabolism
nir00630
Glyoxylate and dicarboxylate metabolism
nir00640
Propanoate metabolism
nir00680
Methane metabolism
nir00720
Other carbon fixation pathways
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01120
Microbial metabolism in diverse environments
nir01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
NSED_04840
00620 Pyruvate metabolism
NSED_04840
00630 Glyoxylate and dicarboxylate metabolism
NSED_04840
00640 Propanoate metabolism
NSED_04840
09102 Energy metabolism
00720 Other carbon fixation pathways
NSED_04840
00680 Methane metabolism
NSED_04840
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nir01004
]
NSED_04840
Enzymes [BR:
nir01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
NSED_04840
Lipid biosynthesis proteins [BR:
nir01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
NSED_04840
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
ACAS_N
Porin_2
Motif
Other DBs
NCBI-ProteinID:
AFS82772
UniProt:
K0BCE2
LinkDB
All DBs
Position
complement(784959..786578)
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AA seq
539 aa
AA seq
DB search
MSNFEFIPTDKQIQESNIYKFMKKHNVLTIDELSEKAKNDLEWYWKSVDEDIGVVWDEPY
TKVLDDSKGIAWSKWFVNGKTNIYKSSVEKFNKTSPEKIAYYFESEDGKQSKISYSELNS
KVSKLANGLKSLGVKKGDVVAIYLPMIEEAILSILAAAKIGAIQTVIFSGYSAESLHIRL
KDCNAKFLIISDGFYRKGKPVSQKKSIEIAVNDTFVEKTILVPYKKIDQYTESKKIIFYD
KLVSVQNDFCDTEILDSEDPLFILYTSGTTGKPKGVIHTHGGFSVFAGHQAAYLIDMQAQ
DTLFWPADIGWITGLVWNVYGLLMMGASAVIYDGGLDFPSSDRVWRMLSEYDATIFGISP
TAVRLFKKNNVEPAKLFSLEKIKNIPTTGEPLDEDSWWWLYEKVGNKKIPIMNLSGGTEI
GGAMLSVFPGMKLKPSTVGIPVPGMNLDVVDENQSPVRGKNGFLIIKSPWPAMTRGLLND
DERYLQTYWSRFKDVWFHGDYVYVDDDNLWYMRGRTDDVINVSGHRMSTAEIEHAVISQ
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
ttgtctaattttgaatttattccaacagacaaacaaattcaagaatccaatatttacaaa
tttatgaaaaaacacaatgtcttaacaatagatgaattgtctgaaaaagctaagaatgat
ttggagtggtactggaaatcagtagacgaagatatcggagttgtttgggatgagccgtat
acaaaagtattagatgactctaaaggaattgcatggtctaaatggtttgttaacggtaaa
acaaatatttacaaatcctcagttgagaaattcaataaaacatcccctgaaaaaattgca
tattattttgaatcagaagatggaaaacaatcaaagatttcatattcagaattaaattca
aaagtatctaaacttgcaaatgggttaaaatctctcggagtcaaaaaaggtgacgtagtt
gcaatttatctgcctatgattgaagaggcaattttgtcaatacttgcagcagcaaaaata
ggtgcgatacaaacagtgattttttctggatatagtgcagaatcattacacatacgatta
aaagattgtaatgctaagtttctaataatttctgatgggttttatcgcaaaggaaaacct
gtttctcaaaaaaaatctatagagattgcagttaatgacacatttgtagaaaaaacaata
ttggttccttacaaaaaaattgatcaatacactgaatctaaaaaaattattttttatgat
aaacttgtttctgttcaaaatgatttctgtgacactgaaattttggattctgaggatcct
ttgtttattttatacacttcgggaaccactggcaagccaaaaggtgtgattcacactcat
gggggattttcagtgtttgcagggcatcaggcggcatatcttattgatatgcaggcacaa
gacacactattttggcctgcagatattgggtggattacaggtctggtgtggaatgtttat
ggtcttttgatgatgggtgcatctgctgtgatttatgatggagggttggactttccctca
tctgatagagtttggaggatgttatcagaatacgatgcaacaatttttggaatatctcca
actgccgtaagattgtttaagaaaaataatgttgaacctgcaaaattattttcattggaa
aaaataaaaaacattcctaccaccggtgaaccccttgatgaggattcatggtggtggcta
tatgaaaaagtcggaaataaaaaaatcccaatcatgaatctttctggaggtactgaaatt
ggaggtgcaatgttatctgttttccctggaatgaaattaaaaccatcgactgtaggaatt
cctgtaccgggaatgaatttggatgtagttgatgagaatcaaagtcctgttagagggaaa
aatggttttttgataataaagtctccttggcctgcaatgacacgtggtttgttaaatgat
gatgaaagatatttgcaaacatactggtctagattcaaagatgtttggtttcatggagat
tatgtgtatgtggatgatgacaatctttggtatatgcgtggacgaacagatgatgtgatt
aacgtatctggtcatcgaatgtctactgctgaaattgaacatgctgtcatatctcaataa
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