Candidatus Nitrosopumilus sediminis: NSED_04850
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Entry
NSED_04850 CDS
T02303
Name
(GenBank) glutamyl-tRNA(Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00970
Aminoacyl-tRNA biosynthesis
nir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NSED_04850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
nir03029
]
NSED_04850
Enzymes [BR:
nir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
NSED_04850
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
NSED_04850
Mitochondrial biogenesis [BR:
nir03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NSED_04850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
TMP_2
Motif
Other DBs
NCBI-ProteinID:
AFS82774
UniProt:
K0BB87
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All DBs
Position
complement(786885..788105)
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AA seq
406 aa
AA seq
DB search
MALNCSTPEKIAFFRKNYFYPDSPKNFQITQLNIYGDTSVGGKGSVMIGDKKINITRIQL
EEDPGRLIYEGSSSKNQITLVDYNRAGTPLVEIVTEPDFETPKEVRDFLNILSDILENLG
VADPSLEGAMRADANVSIEGGKKVEIKNIGSFHDLEKAVHFEITRQESLHSREIEIIQET
RHWDDRRKITISSRSKEEELDYRYFLEGDIPWVKIDPEIKIKLISEMPESISSKKERYIS
KYNIPAQVADVLSSDKYYSDLFEESHTESNAKEIANIITTDLMGLVDTREKREASKLTSV
HLKELADSIQSGKISRNSSKNALHEILKTGKDLSTVIKELDLGNVSDESELSGIITQVVS
EEAQAVEQAKSNPQTINYLVGKVMQKTKGKADPALTLNLLKKQIGV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaattgttcaactccggaaaaaattgcgttctttaggaaaaattatttttat
cctgattctccaaaaaattttcaaatcactcaactcaacatctacggtgatactagtgtg
gggggaaagggctcagtaatgataggtgataaaaaaatcaatatcactaggatacagcta
gaagaagatcctgggagattgatttacgaaggaagttcttctaaaaatcagataactctt
gtagattataatcgtgcaggtactcctctggtagaaattgttacagagcctgattttgag
acccctaaggaagtacgcgactttctaaacattctatcagatattcttgaaaatctagga
gttgcagatcctagtttagagggtgcaatgagagctgacgccaacgtttcaattgaaggt
ggaaaaaaagtcgaaataaaaaatatcggttcatttcatgatttagaaaaagcagttcat
tttgagatcacacgacaagaaagtctgcattctcgtgaaattgaaattattcaagaaaca
cgacattgggatgacagaagaaagattacgatatcatctcgttctaaagaagaggaattg
gattatcgttatttcttggaaggtgacattccatgggttaagattgatcctgaaatcaaa
attaaattaatttctgaaatgcctgaaagcatcagttctaaaaaagaaagatatatttca
aaatataacatacctgcacaagtagctgatgtgctatcatcagacaaatattattctgat
ttatttgaggagtctcacactgaatcaaatgcaaaagaaattgcaaatataattacaact
gatttgatggggctagtagatacaagagaaaaacgtgaagcctcaaaactgacatctgtc
catctaaaagaattagcagactctatacaatcaggtaaaatatctaggaattcttctaaa
aatgcattgcatgaaattttaaaaactggaaaagatttgtcaactgttatcaaagaacta
gatcttggaaatgtgtctgacgaatctgaattatctggaattataacacaagtagtctct
gaagaagcacaagctgttgagcaagcaaaatcaaaccctcaaacaataaattatttggta
ggcaaagttatgcaaaaaacaaagggaaaagcagatcctgcattaactttgaacttgcta
aaaaaacagattggtgtatga
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