Candidatus Nitrosopumilus sediminis: NSED_04990
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Entry
NSED_04990 CDS
T02303
Name
(GenBank) helicase c2
Organism
nir
Candidatus Nitrosopumilus sediminis
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Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
Helicase_C
YicC-like_N
ResIII
Motif
Other DBs
NCBI-ProteinID:
AFS82802
UniProt:
K0BCI5
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Position
complement(816986..818386)
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AA seq
466 aa
AA seq
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MDSEKVNNDRRAMRWGLTCDKGECQERVNKNGKEIFEVCKFKPTIKQVEENTQDSLSCHY
YMQKYDALVSKHSLWNYHAFFTIMKFNKKLFEEYLDRKVTVFDEAHKIEDQIIQFVGFDI
FSGQVDECNLNSEKYDFTDLDSMIQLTDDMAFSYAKKIKDIKESAAFQNNPDYELITGLE
RRHDRSAQAKIDIMSDKDNFVVNEPMKDLNGNFRTISVKPIDVSKFANSFFETEYQIFMS
ATIDKSSFCENMGLRQDDVAFVDTPKSPFPIENRSIDLLNIRRLSYGSTEKDELEVIKTI
DRIMDEHSDERGLILTSSIPRCQKILRYLSPKNTQRIRLCHSKNKDGKTQDEVISEHATD
PTGVLLSSSLWEGVDLKDDLSRFQIIAKVPYPNYTEKRTRAKMNKFPLWYTSQTLTKILQ
GFGRSIRSEDDWAKTYVLDTAVNNVFFKGQQMIPKAYYDVLGIDTA
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggattcagaaaaagtcaataatgatagaagggcgatgagatgggggttgacctgtgat
aaaggtgaatgccaggaaagggtgaataaaaatgggaaagaaatttttgaagtttgtaaa
ttcaagcctacaatcaaacaagtagaagagaatactcaagattctctgtcatgccactat
tacatgcaaaaatatgatgcactagtttcaaaacattctctttggaattatcatgcattc
ttcacaattatgaaatttaacaaaaagctctttgaggaatatcttgatagaaaagtaacc
gtttttgatgaagcccacaaaatagaggatcaaattattcagtttgttggatttgatatt
tttagtggacaagtggatgaatgtaatctgaattctgaaaaatatgattttactgattta
gattcaatgatacagctaacagatgatatggctttttcatatgccaaaaaaattaaagac
attaaagaaagtgcagcgtttcaaaataatccagattatgaattgattactggattggag
cgccgacatgaccggtcggctcaagcaaaaattgacatcatgtctgataaagacaatttt
gttgttaatgaacctatgaaagatttgaatggtaattttagaaccatttctgtaaagcca
atcgacgtttccaaatttgcaaattctttttttgaaactgagtatcaaattttcatgtct
gcaacaattgataaatctagtttttgtgaaaacatgggattgcgacaagacgatgttgca
tttgttgacactccaaaatccccattccctattgaaaatagaagtattgatcttcttaac
atcaggaggttaagttatggttcaactgaaaaggatgaacttgaagtgattaaaacaatt
gatcgaataatggatgagcattctgatgaacgtggattaattttaacatcatctattcct
agatgtcaaaaaattcttagatatttgtctcccaagaatactcaaagaattagactatgt
catagtaaaaacaaagatggaaaaactcaagacgaggtaatttctgaacatgctactgat
cctacgggagttttgctttcctcttcgttatgggaaggtgttgatttgaaggatgatttg
tcaagatttcaaataattgccaaggttccatatccaaattacactgaaaagagaacaagg
gcaaaaatgaacaaattccctctatggtatacctctcaaacccttactaagatccttcag
ggttttgggcgttcaattagaagtgaagatgattgggcaaaaacatacgttttggatact
gcagtaaataatgtctttttcaaagggcagcaaatgattccaaaagcatactatgatgtt
ttaggaatcgatactgcttga
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