Candidatus Nitrosopumilus sediminis: NSED_05095
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Entry
NSED_05095 CDS
T02303
Name
(GenBank) DEAD/DEAH box helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
NSED_05095
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
MZB
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFS82823
UniProt:
K0B9H2
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Position
832371..835031
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AA seq
886 aa
AA seq
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MVNELKTSFMKFCYNCDTRMVQSYEDVGGPWVCPKCNPEKIQIKSPTYGVNYSGRTKQCS
KGCGAEIYWDEGFKSDSGKFIPIDSRTDEPHRCDGPTKSGEYFPDEIKKYARVEKKDPAP
KIPIPQSILFDINKIPKSLIENDYIIREIIQGHKEESLALIHYERLIAPEADKIPIESLK
DVLSDNIIKGLEKYGFSGLLPFQEESIREILKGNNSIISAPTGSGKTEAFAIPILQKISE
NPTPGVFTLLVYPLNALIDDQVSKISDLIQKCKLGNKVGIYSIHGGQSTEYKDMIISDAN
EKALIIATNFDFINYHLILQDKKWNELFKNAKIIVIDEAHSYTSFHGSNVYQVLKRMKRY
MGKVQFIGSSATLDNSKEFFSNMFDLPESSFSYIKSEFRRKQNMHMFFIMPRKFRQRTTM
EMLSSICYKNKSTQLVFSNSHNDAEFLASNVENANEGIRIQIHRGGLDQRDRKLYESQMK
AGELDVLSCTPTLELGIDIGHVDVVISAFKNEFDSFIQRIGRAGRMGQKSYAICVFDPDD
AACHYFARHIDEYLKQDHIIPINKKNPIISDKHIESAEIEEISATESDKSQFFDFANSIN
LRGTSGEIGIYYNSRKIGTRGVPVGYYQLHQKAIYHFNKQNYEVNSLIKSQNGARAYLVR
SNEKGKRTMPIVKTSIIQASEGKAKHREVIVKDKKISLRYGIISLDRTITGYMKGNYNES
ADKFTMYNGSSISGWRNFHWKSKHSAVSITIPSEFLSKSISNSKSPIVNDSRVHTIAHVL
VNASKILTKSESSDIDSYYDNGIIYIYDNSSDGFNGCSKIIFDEFEKVLNIAFSLIEDCD
CPTEKTEEKDWGGCPKCTFTTGYCQTKNKELTKKGAKEFLLSFQKP
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgagctaaaaacttcattcatgaaattttgctacaattgcgacacaaggatg
gtacaaagctatgaagatgttggagggccgtgggtatgccctaaatgcaatcccgaaaaa
attcagatcaaatccccaacgtatggtgttaattattcaggaagaacaaagcagtgctct
aaaggatgcggtgctgaaatttactgggatgagggattcaaatcagacagtggaaagttc
atcccaattgattcaagaacagatgagccacatagatgtgatggaccaacaaaatcagga
gaatatttcccagatgaaataaaaaaatatgccagagtagagaaaaaagatccagcacca
aaaattccgataccgcaaagcattctttttgacataaacaagattccaaaatcactaatt
gagaatgactatatcatcagagagatcattcaagggcataaagaagaatcacttgcgctt
atccactatgaaagattgattgcgccagaggctgataaaatcccaattgaatctctaaaa
gatgtcttatcagataacatcatcaaaggattagaaaagtatggattttcagggctcttg
ccatttcaagaagaatccattcgcgaaattctaaaaggaaacaattcaataatttcagca
cccacaggctcaggaaagacagaagcttttgccataccaattcttcaaaaaatttcagaa
aatcccacaccaggagtgtttaccttactggtgtatccactaaatgcgctaatagatgat
caagtatcaaagatatctgatttaattcagaaatgcaaactaggaaacaaagttggaata
tactccattcatggaggtcaaagtacagaatacaaagacatgataatttcagatgcaaat
gaaaaagctctaatcattgcaacaaattttgattttattaattaccacctaattttacaa
gacaaaaaatggaatgagttattcaaaaatgcaaaaataattgtaatagatgaggcccat
tcctatacaagttttcatggttcaaacgtgtaccaagttcttaagaggatgaagcgatac
atggggaaagttcaatttatcggatcatctgctacgctagataactcaaaagagtttttt
tcaaacatgtttgatttacctgaaagttcattctcatatatcaaaagtgaatttagaagg
aagcaaaacatgcacatgtttttcataatgcctagaaaattcagacaaagaactacaatg
gagatgttatcatctatttgttacaaaaacaaatcgactcagctggtttttagtaattct
cacaacgatgcagaatttcttgcatcaaatgtcgaaaatgcaaatgagggaatcagaatt
caaattcacagagggggactagatcaaagagataggaaattgtacgagtcccaaatgaaa
gcaggtgaacttgatgtcctttcttgcacacccacactggaattaggaatcgatatcgga
catgttgatgtagtaatatctgcattcaaaaacgagtttgattcatttattcaaagaatc
ggcagagctggacggatgggtcaaaaatcatatgcaatctgtgtatttgatccagatgat
gcggcatgtcattattttgcacggcatatcgatgaatatctaaaacaagatcacatcata
ccaattaacaagaaaaatcccataatttctgacaaacatatcgaatcagcagagatcgaa
gagatatctgcaacagaatcagataaatctcaattttttgattttgcaaacagcataaac
ttacgagggacatcaggagaaattggcatctattataattctagaaaaatcgggacacgt
ggagttcctgtaggatattatcaattacatcaaaaggcaatctaccattttaacaagcaa
aactatgaggttaattcactgattaaatctcaaaatggagcaagagcatacctcgtaaga
tcaaatgaaaagggcaagaggacaatgccaatagtcaaaacaagtattattcaggcatca
gaagggaaagcaaagcacagagaggtcatcgtaaaagacaaaaaaatctctttgagatat
ggaataatctctctagacagaaccattacaggatatatgaaaggaaactacaatgaatca
gcagacaaattcacaatgtataatggaagtagtatatcagggtggagaaacttccattgg
aaatcaaaacattcagcagtaagcattaccataccttcagagtttctatcaaaatcaatc
tcaaactctaaaagtccaatagtcaatgattccagagtacatacaattgcccacgtacta
gtaaatgcaagcaagattttaacaaagtcagaatcaagtgacatcgattcatattatgac
aatggaataatctacatatacgataattcttctgacggatttaacggatgcagtaaaatt
atttttgatgaatttgaaaaagttctcaatatcgctttttctttgatagaggattgtgat
tgtccaacggagaaaactgaagagaaggattggggtggatgtccaaaatgtacattcaca
acaggttattgtcagacgaaaaataaagaattgacaaagaagggggcaaaagaatttctt
ttatcttttcaaaaaccttga
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