Candidatus Nitrosopumilus sediminis: NSED_05640
Help
Entry
NSED_05640 CDS
T02303
Name
(GenBank) response regulator receiver protein
KO
K22491
MerR family transcriptional regulator, light-induced transcriptional regulator
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nir03000
]
NSED_05640
Transcription factors [BR:
nir03000
]
Prokaryotic type
Helix-turn-helix
MerR family
NSED_05640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B12-binding
B12-binding_2
Response_reg
iREC
Mad3_BUB1_I
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AFS82930
UniProt:
K0BD40
LinkDB
All DBs
Position
929568..930410
Genome browser
AA seq
280 aa
AA seq
DB search
MVYIRAKKVKSDQYLYLVKSIWDSKKSTSRQEIVKYLGKASDVVKDDIPIEYRNDPKVLS
ILASHNPKDIKKREEATRKSKKRLYKKLTEGNIEESVKIYEEYVKIFNEADFFDKILKPV
MYDIGEDWASNKISIATEHVASNIAQTLVKIIMDKVSGTANKKKVLICVPLGEEHHLGCD
VLETYLSIKRFKVYNIGTSIPTESIISFIENNNPDIVLISITLQDNLSAGQRLVKKIKEK
HNIPILIGGCAMQSKKIPKIDAKIVLDVKLEEIPKIIRSA
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggtctacatcagagccaagaaagtaaaatcagatcagtatctttatctcgttaaaagc
atatgggattcaaaaaaaagcacatctagacaagagattgtaaagtatcttggaaaggca
tcagatgtagtaaaagacgatataccaatagaatacagaaacgaccccaaagtgttgtca
attcttgcatcacataatccaaaagacatcaaaaaaagagaagaggcaacaagaaaatca
aagaaacgactatacaaaaaattaactgaggggaatatcgaagaatctgttaaaatttac
gaagaatatgttaaaatttttaatgaagcagatttttttgataaaatcctaaaaccagtt
atgtatgatattggcgaagattgggccagtaacaaaataagtatagcaacagagcatgta
gccagtaacattgcccagaccctagtcaaaattatcatggataaagtttcaggaacagca
aacaagaaaaaagtgctaatatgcgttccattaggagaagaacatcatttaggatgcgac
gtattggaaacatatctttcaataaaacgattcaaagtttacaatattgggacttctatc
ccaacagaatcaatcataagttttattgaaaataataatcccgacatagtactgatctca
ataacattacaagataatctttctgcaggtcaaagactagtaaaaaagatcaaagaaaaa
cataacattccaattttaattggagggtgtgccatgcaatctaaaaaaatcccaaaaatt
gatgccaaaatagtattagatgtaaaattagaagagattccaaaaattatacgaagtgca
taa
DBGET
integrated database retrieval system
