Candidatus Nitrosopumilus sediminis: NSED_05680
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Entry
NSED_05680 CDS
T02303
Name
(GenBank) biotin--acetyl-CoA-carboxylase ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00780
Biotin metabolism
nir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
NSED_05680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nir03000
]
NSED_05680
Enzymes [BR:
nir01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
NSED_05680
Transcription factors [BR:
nir03000
]
Prokaryotic type
Helix-turn-helix
Other families
NSED_05680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
MarR_2
HTH_27
UPF0122
HTH_24
Fe_dep_repress
HTH_34
HTH_5
Lipocalin_7
Motif
Other DBs
NCBI-ProteinID:
AFS82938
UniProt:
K0B9T7
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All DBs
Position
934671..935678
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AA seq
335 aa
AA seq
DB search
MIYNSFDNPGLVKVLTFLQTHNTEYLSGQDLSDVLRISRVAVWKHIKKIQELGYVVESKQ
KLGYKLISNSELLLPWEITSNLKTKVIGQQAYYFDSIDSTQNQALKMASDPANEGAVIVA
SKQTGGRGRSGRKWISPKGGIWISIIFQPKFDISITTLFPIASALALSIAIEKTFSIKPE
LKWPNDLTIKGKKVAGMLVDASLESNKIENLVLGVGINFGVNVKQIEKVLKETPNFYGIA
SLNGQKQKVKPVQLVQSFLLELEKIYKLLNSKQTKKIISEWTVRSSTIGKNVELDTIGGK
IKGKAIKIDEDGALIIAENGKSHKVIAGDITHVSK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttgatttacaattcatttgataatccaggattagtcaaagtattgacatttttacaaact
cacaatacagaatatctctcagggcaggatttgagtgacgtgttacgaataagcagagtg
gcagtatggaaacatatcaaaaaaattcaagagttaggatacgttgtcgaatcaaaacaa
aaattaggatacaagttaatttcaaattcagaattattattaccatgggaaatcacttca
aatttaaaaacgaaggttattgggcaacaagcatattattttgattcaatagattcaact
caaaatcaggcattaaagatggcaagcgaccctgcaaatgaaggggcagtaatagttgcg
tcaaaacaaacagggggtcgtggaagatctggcaggaaatggatttcgcctaaaggagga
atatggatttcaataatttttcaaccaaaatttgatatttcgattacaacattatttcca
atagcatctgcacttgcattgtcaattgcaatagaaaaaacattttcaatcaagcctgaa
ttaaaatggcctaatgatttaaccattaaaggcaaaaaggtggcagggatgttagtagat
gcatcattggaatcaaacaagattgaaaacttggtgttaggagttggaattaattttggt
gtcaatgtaaaacaaattgaaaaagtactaaaagaaactcccaatttttatggaatagca
tcgttgaacggtcaaaaacaaaaagttaagccagtgcaacttgttcaatcgtttttgtta
gaattagaaaaaatatacaaattattgaattcaaaacaaacaaagaaaattatttctgaa
tggacagtaagatcatcaaccataggaaaaaatgtggagttagatacaattggtggaaaa
atcaaaggtaaggcaatcaaaattgatgaagacggagcgttaattatagcagagaatggc
aaatcgcacaaagtcatagcaggagatatcacgcatgtatcaaaataa
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