Candidatus Nitrosopumilus sediminis: NSED_06195
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Entry
NSED_06195 CDS
T02303
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K03652
DNA-3-methyladenine glycosylase [EC:
3.2.2.21
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NSED_06195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nir03400
]
NSED_06195
Enzymes [BR:
nir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
NSED_06195
DNA repair and recombination proteins [BR:
nir03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NSED_06195
Prokaryotic type
NSED_06195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pur_DNA_glyco
Motif
Other DBs
NCBI-ProteinID:
AFS83041
UniProt:
K0BFG4
LinkDB
All DBs
Position
1027803..1028360
Genome browser
AA seq
185 aa
AA seq
DB search
MTILPREFYSKDTVTVAKNLLGKKIVRKIGKDKISGIITETEAYRHRDDPASHAFTKITE
RNKVMFEEVGTAYVYFTYGMYFCFNVVARAPKTEAGAVLIRAIEPEKGVDIMQKNRSRAD
LKNLTNGPGKLAQALRITKEDYGVDLTKRSKLYITEGVKPNKIIASPRIGITKAVEKLWN
FKIEI
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
ttgactatacttcctagagaattttattcaaaagatacagttactgtagcaaagaatctt
ttagggaaaaaaattgtcagaaaaattggcaaggataaaatttcgggaataattacagag
acagaagcatatagacacagagatgaccctgcaagtcatgcatttacaaaaattacagaa
agaaacaaggtaatgttcgaagaggtaggaacagcgtacgtatattttacatatggaatg
tatttttgctttaatgttgtagcccgagcaccaaaaacagaggcaggtgcagtacttatt
cgggcaattgagcccgaaaagggagtagacattatgcaaaaaaatagaagcagggcagat
ttgaaaaatcttaccaatggtccaggaaaactagcacaagcacttaggattacaaaagaa
gattatggggtagatttaacaaaaagatcaaaattatacattacagagggtgtaaagcca
aataaaataattgcatcaccaagaatcggaatcactaaggcagtagaaaagttatggaat
tttaaaatagaaatttaa
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