KEGG   Candidatus Nitrosopumilus sediminis: NSED_06515
Entry
NSED_06515        CDS       T02303                                 
Symbol
rpl40e
Name
(GenBank) 50S ribosomal protein L40e
  KO
K02927  ubiquitin-large subunit ribosomal protein L40e
Organism
nir  Candidatus Nitrosopumilus sediminis
Pathway
nir03010  Ribosome
Brite
KEGG Orthology (KO) [BR:nir00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    NSED_06515 (rpl40e)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    NSED_06515 (rpl40e)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:nir03011]
    NSED_06515 (rpl40e)
   04121 Ubiquitin system [BR:nir04121]
    NSED_06515 (rpl40e)
Ribosome [BR:nir03011]
 Ribosomal proteins
  Eukaryotes
   Large subunit
    NSED_06515 (rpl40e)
  Archaea
    NSED_06515 (rpl40e)
Ubiquitin system [BR:nir04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   NSED_06515 (rpl40e)
SSDB
Motif
Pfam: Ribosomal_L40e Zn_Ribbon_1
Other DBs
NCBI-ProteinID: AFS83103
UniProt: K0BA41
LinkDB
Position
1086017..1086184
AA seq 55 aa
MPVTDPEKKRIAQQARLVMKICFKCGCRNDIDATRCRKCRNPYLRLKNRNLGVKK
NT seq 168 nt   +upstreamnt  +downstreamnt
atgccagttacagaccccgagaagaaaagaattgctcaacaagcacgtcttgtaatgaaa
atttgtttcaaatgcggttgtagaaatgacatcgatgcaacacgatgcagaaaatgcaga
aatccatacttgagactaaagaatagaaatctcggcgttaagaagtag

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