Candidatus Nitrosopumilus sediminis: NSED_06930
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Entry
NSED_06930 CDS
T02303
Name
(GenBank) DNA-directed RNA polymerase subunit E RpoE2
KO
K15171
transcription elongation factor SPT4
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
NSED_06930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nir03021
]
NSED_06930
03019 Messenger RNA biogenesis [BR:
nir03019
]
NSED_06930
Transcription machinery [BR:
nir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
NSED_06930
RNA polymerase I system
NSED_06930
Messenger RNA biogenesis [BR:
nir03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
NSED_06930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Zn_Ribbon_TF
DZR
HypA
TackOD1
zf-ChsH2
Zn_ribbon_3
VP_N-CPKC
Motif
Other DBs
NCBI-ProteinID:
AFS83184
UniProt:
K0BCI1
LinkDB
All DBs
Position
1159674..1159862
Genome browser
AA seq
62 aa
AA seq
DB search
MAREMACRKCKHVTTLKVCPNCKSSDLTPDWNGVVLVVDPTNSEISKTLGITTKGKYAIK
VT
NT seq
189 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagagatggcatgccgtaaatgtaaacatgtgacaactctaaaagtatgtcca
aattgtaaatcatcagacttgacaccagattggaatggagtggtactagttgttgaccca
acaaattcagaaatttcaaaaactttaggcattactactaaaggcaaatatgcaatcaaa
gtaacataa
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