Candidatus Nitrosopumilus sediminis: NSED_06980
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Entry
NSED_06980 CDS
T02303
Name
(GenBank) metallophosphoesterase
KO
K03547
DNA repair protein SbcD/Mre11
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nir03400
]
NSED_06980
DNA repair and recombination proteins [BR:
nir03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NSED_06980
Archaeal homologous recombinant proteins
NSED_06980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
WipA_Phos
Motif
Other DBs
NCBI-ProteinID:
AFS83194
UniProt:
K0BCJ5
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All DBs
Position
1167629..1168771
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AA seq
380 aa
AA seq
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MLFSHISDMHLGLVQYGSEERAQDVYDVFNQAIDTSIKDHVDFVIFAGDIFHVPNPNGTA
IIQMANGLKRLKENNIDSFFILGEHDISRIRSTPIPYVYHNLEFSKYIGQGNPIEYKGVL
IAGFDKIRKSEIPQYESKFAEIDKIAQVHSGHKILVLHQGITEFNKFAGELQSTDLPKNF
TYYAMGHLHDTDIKQFNHLNGPVVYPGSIELTTSEGIKEAKKGFFEVDISGKDATPKWIE
LDTRPQFSFKTEYQELSKTIDEISEKIKDFTKKPIVEVIIKGGNIETDHIQAQIARLNSM
VLRCFWRISTKQVSDSSVFLDRPNIIDDEMFRLSVDVLGSEQAASFAIKELLPVLSSGEI
KEASEIIIENFEKFKKEKKQ
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgttattttcacatatttcagacatgcatttgggattagtgcaatatggttcagaggaa
cgtgcacaagatgtctatgatgtttttaatcaagcaatagatacatcaattaaagatcat
gtagattttgtaatttttgcaggagatatttttcatgttccaaatcccaatggaacagcc
ataattcaaatggccaacggattaaaaagattaaaagaaaataacattgattcatttttt
attttgggtgaacacgatattagcagaattaggagcaccccaattccatatgtatatcac
aacttagaattttcaaaatacataggtcaaggaaacccaattgaatacaaaggggttcta
atagcaggatttgataaaataagaaagtcagagataccacaatatgaaagcaaatttgca
gaaattgacaaaatcgctcaagttcattcgggtcataaaattttagttttgcatcaggga
atcacagaatttaacaaatttgcaggcgagttgcaatcaactgatttgccaaaaaatttt
acatattatgcaatgggacatcttcatgacacagacattaaacagttcaatcatctaaat
ggaccagtagtttatcctggctcaattgaattaacaacaagtgaaggaattaaagaagct
aaaaaaggattcttcgaagtagatatttctggcaaagatgcaacacccaagtggattgaa
cttgatacaagaccacaattttcatttaaaacagaatatcaggaattatcaaagaccatt
gatgaaatttctgaaaaaataaaagattttacaaaaaagccaattgtggaagtaatcata
aaggggggaaatattgagacggatcatatccaagcacaaattgcaagactaaattcaatg
gttctgagatgtttttggagaataagtacaaaacaagtttcagattcatcagtatttcta
gacagaccaaacatcatcgatgatgagatgttcagattgtccgttgatgtattgggatca
gagcaagccgctagttttgcgataaaagaactccttccagttttatcttcaggtgaaatc
aaagaagcatcagaaattattattgagaattttgagaaatttaaaaaggagaaaaaacaa
tga
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