Candidatus Nitrosopumilus sediminis: NSED_07940
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Entry
NSED_07940 CDS
T02303
Name
(GenBank) modification methylase
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00270
Cysteine and methionine metabolism
nir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
NSED_07940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nir03000
]
NSED_07940
03032 DNA replication proteins [BR:
nir03032
]
NSED_07940
03036 Chromosome and associated proteins [BR:
nir03036
]
NSED_07940
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
nir02048
]
NSED_07940
Enzymes [BR:
nir01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
NSED_07940
Transcription factors [BR:
nir03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
NSED_07940
DNA replication proteins [BR:
nir03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
NSED_07940
Chromosome and associated proteins [BR:
nir03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
NSED_07940
Prokaryotic defense system [BR:
nir02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
NSED_07940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-ProteinID:
AFS83380
UniProt:
K0BEC6
LinkDB
All DBs
Position
complement(1331433..1332422)
Genome browser
AA seq
329 aa
AA seq
DB search
MEKNTNFKFIDLFAGIGGMRIAFEGAGGKCVFSSEWNKYAQETYEKNFGEVPFGDITKID
ENDIPDHDVLVAGFPCQPFSLAGIPVKKFHGHPVGFKDLTQGTLFFDIARILKAKKPSAF
LLENVKNLKSHDKGNTLKTILRVLEDELGYDVHYEVLDAVNVVPQHRERLFIAGFITPRN
FKFPKIPNKNIKLSDILEKKVDKKYVLTDGTWNALKRHLERHRKKGNGFGYTIADKKKVA
NTLSARYYKDGAQILISRGQTRNPRRLTPNECAKLMGFPKNFQKHESDNHAYRQFGNSVV
VPVVKVIAKEIIRNLPVQKKLLTPMICRK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaaaatactaattttaaattcatagatctttttgcgggaattggaggtatgaga
atagcctttgagggtgcaggtggcaaatgtgtattctcttcagaatggaataaatatgca
caagagacatacgaaaaaaactttggggaagttccatttggtgatattactaagattgat
gaaaatgacattcctgatcatgatgttctggtggcaggatttccgtgccagcctttctct
ttagctggcattccagtaaaaaaatttcacggacatcctgtcggatttaaggatctgacc
caaggaactttgttctttgatattgcacgaatacttaaagcaaaaaaacctagtgccttc
ttgctggagaatgtaaaaaacttaaaaagtcatgacaaaggcaatactctgaaaactatt
ttgcgagttctggaggatgaacttggatacgatgtacattatgaagtgcttgatgcagtc
aatgtggttccacaacatcgtgagagattgtttattgctggctttatcacgccacgtaat
ttcaaatttccaaaaattccaaacaagaatatcaaactgtctgacattcttgaaaagaaa
gtggacaagaaatatgtccttactgacggaacttggaatgcacttaagcgtcatctggaa
agacatcgaaagaaaggaaacgggttcggatatacaattgcagataagaaaaaagttgca
aataccttgagtgcaagatactacaaggacggtgctcagattctcatatcccgtggacaa
acaagaaatccaagaaggcttactcctaacgagtgtgcaaaattgatgggatttccaaag
aacttccagaaacatgaatccgacaatcatgcatacagacagtttggaaactctgtagtt
gttccagtcgttaaggtgattgcaaaagaaataattcgaaaccttcccgtacagaaaaaa
cttttgactccaatgatttgtagaaagtga
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