Candidatus Nitrosopumilus sediminis: NSED_08155
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Entry
NSED_08155 CDS
T02303
Name
(GenBank) pyridoxal biosynthesis lyase PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00750
Vitamin B6 metabolism
nir01100
Metabolic pathways
nir01240
Biosynthesis of cofactors
Module
nir_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
NSED_08155
Enzymes [BR:
nir01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
NSED_08155
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GFIT
Motif
Pfam:
SOR_SNZ
ThiG
NMO
His_biosynth
IGPS
Peptidase_S66C
Motif
Other DBs
NCBI-ProteinID:
AFS83423
UniProt:
K0BB74
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All DBs
Position
complement(1364175..1365143)
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AA seq
322 aa
AA seq
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MLPLSGERKDAKGIIFDKINSVDTLRGSSTVKRGFAHMLKNGVVMDVTTVEQAQIAEEAG
AVSVMVLDKLPSEVRKAGGVARTASIRIIEDIMDSVTIPVMAKCRIGHVNEALVLQETDV
DMIDESEVLTPADELRHIWKWDFTTPVVNGARSLAEALRRIEEGASMIRTKGEPGTGNVA
EAIKHIKKVNDELRTIKSIYDSGDNQDLVRMAREFKVSYDIVEQTAKLGRLPVVNFAAGG
IATPADAAYLMSLGCDGIFVGSGIFNSDDARERARAIVLATTFWNESDKVKEAQKMIDER
QSMIGLDVNTLELRMQDRGGSA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgttaccattatctggtgaacgaaaagatgctaaaggaattatttttgataaaataaac
tccgttgatactttacgtggttcttctactgttaaacgaggttttgctcatatgctaaaa
aatggagttgtaatggatgttacaactgtggagcaagcacaaatagccgaagaagctggt
gcagtttctgttatggtattagacaagcttccatctgaggtaagaaaagccggtggggtt
gcacgaactgcaagtattagaattattgaagacataatggattctgttaccatccccgtc
atggcaaagtgtagaattggtcatgtcaatgaagcactagttttgcaagaaaccgatgtt
gatatgattgacgaatctgaagttttaacacctgctgatgaacttcgtcatatttggaaa
tgggattttacaacacctgttgttaatggtgcaagatcattggctgaagctttgagaaga
attgaagaaggtgcttcgatgattagaactaaaggagaacctggaactggtaatgttgct
gaagcaatcaaacatatcaaaaaagtaaatgatgaactaagaacaataaaatcaatttat
gattctggtgacaatcaagatttagttagaatggcaagagaattcaaagtatcttatgat
attgttgaacaaactgcaaaactcggaagattgccagttgtaaattttgctgcaggtgga
atagcaacccctgctgatgcagcatatcttatgtcacttgggtgtgatggaatatttgtc
ggctctggaatttttaattctgatgatgcaagagaaagagcacgtgcaatagttttagct
actactttttggaatgaatctgataaagtcaaagaggcacaaaaaatgattgatgaaaga
caatccatgataggattagatgtaaacactcttgaattacgcatgcaagatcgtggaggt
tctgcatga
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