Candidatus Nitrosopumilus sediminis: NSED_08195
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Entry
NSED_08195 CDS
T02303
Name
(GenBank) phenylalanyl-tRNA synthetase subunit alpha
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NSED_08195
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nir01007
]
NSED_08195
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nir03016
]
NSED_08195
Enzymes [BR:
nir01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
NSED_08195
Amino acid related enzymes [BR:
nir01007
]
Aminoacyl-tRNA synthetase
Class II (U)
NSED_08195
Transfer RNA biogenesis [BR:
nir03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
NSED_08195
Prokaryotic type
NSED_08195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
tRNA-synt_2
tRNA_synthFbeta
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
AFS83431
UniProt:
K0BGS2
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All DBs
Position
complement(1372142..1373530)
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AA seq
462 aa
AA seq
DB search
MSQVFHEIEKKIIASLRDNPKQTPESLEKSTHLSPDQIRRGIEWLKLKDLAIVTESQSSV
ISLGKNGIESFQKGLPERRLLDLLKSGPKKLSDLQKELGFVFGPSIGLARKNNWIEASSD
QISIKNFPSELPGEKTLKLIGNEKLSKDKLDPNDLSGLLKRPDFIIEDIIKSKEVSLSDS
AKSIELSDTAGEIDVEAKVPEVFVARTHPLKDTINEIREIFVTLGFSEIFGNMTQSSFWN
FDALFTPQDHPARELQDTFYLDKINAKKIGTPDQIRKVSESHKKNWRYQWDINEARKMVL
RTHTTCVTIKHLAENKPDEARIFSLGRVFRNEKVSYKHLVEFNQIEGVVVGKDASLRNLM
GIQREFYKRIGITKIKFWPTFFPYTEPSLQTMVYNEKLGKWIELFGMGIFRPEVTKPLGI
TKPVLAWGGGIERIAMLKYDLDDVREFYNNNLGWLRSATKCQ
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgcaagtttttcatgagattgaaaaaaaaattattgcctctttgagagataatccg
aaacaaactcctgaatcattagaaaaatctacacatctttcaccggatcaaattagacgt
ggaattgagtggttaaaattaaaagatcttgctattgttactgaatcacaatcaagtgtt
attagtctaggcaaaaacgggattgaatcttttcaaaaaggattgcctgaaagaagatta
ctggatttactaaaatctggaccaaaaaaattatctgatttacaaaaagaactggggttt
gtttttgggccttctataggattagctcgaaaaaataattggattgaagcatcatctgat
caaatttctattaaaaatttcccgtctgaacttcctggtgaaaaaactctcaaacttatt
ggaaatgaaaaattatctaaagataaacttgatccaaacgatttatctggacttttaaaa
agacctgattttattattgaagatattataaagtccaaagaagtttctttatctgattct
gccaagtctatagaactttcagatactgctggagaaattgatgttgaagctaaagttcca
gaagtatttgttgcaagaactcaccctctaaaagataccataaacgaaattcgtgaaata
tttgttacgttaggtttttcggaaatttttggaaacatgactcaatcaagcttttggaac
tttgatgcgctattcacaccacaggatcatcctgcaagagaattgcaagatacattttat
ctagataaaataaatgctaaaaaaattggaacacctgatcaaattaggaaagtttctgaa
tctcataagaaaaattggcgatatcaatgggatatcaatgaagcaagaaagatggttttg
agaactcacacgacttgcgttacaatcaaacatttagctgaaaataaaccagatgaggca
cgaattttctcattgggtcgtgtttttcgtaatgagaaggtcagctacaaacatcttgtt
gaatttaatcaaattgagggagtcgtagtagggaaagatgcatctttaagaaatctaatg
gggattcagagagagttttacaaacgaattggaataactaaaataaaattttggccgaca
tttttcccttacactgaaccctcattgcagacaatggtatataatgaaaaattaggaaaa
tggattgaattatttggaatgggtatttttagacccgaagtcacaaaacctcttggaata
accaaacctgttttagcttggggtggtggcattgaaagaattgccatgttaaaatatgat
ctagatgatgttagagaattttacaacaacaatttaggttggttgaggagtgctacaaaa
tgccagtag
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