Candidatus Nitrosopumilus sediminis: NSED_08585
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Entry
NSED_08585 CDS
T02303
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00521
Streptomycin biosynthesis
nir00523
Polyketide sugar unit biosynthesis
nir00541
Biosynthesis of various nucleotide sugars
nir01100
Metabolic pathways
nir01110
Biosynthesis of secondary metabolites
nir01250
Biosynthesis of nucleotide sugars
Module
nir_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NSED_08585
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NSED_08585
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NSED_08585
Enzymes [BR:
nir01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NSED_08585
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AFS83509
UniProt:
K0BDH7
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All DBs
Position
complement(1452193..1452756)
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AA seq
187 aa
AA seq
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MPFTFKRLNIPDVVLIEAKSFPDDRGFFLESFKESSFISNGIVTRFVQDNFSHSSQGVLR
GLHYQKNPKAQSKLVTALRGEIFDVAVDIRKDSPTYGKWVGEILSESNHKSLYIPEGFAH
GFCVISKTADVLYKVNNEYSPEHEKGIIWNDPDLKITWPIENPILSQKDTQLSSLKDADN
NFTYQSH
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
gtgccatttactttcaagagattaaacatacccgatgtggtacttatagaagcaaaatca
tttcctgatgataggggttttttcctagaaagttttaaagaatcaagcttcatttctaat
ggaattgtcacaagattcgtacaggataatttctcgcattcatcccaaggagttttacgt
ggactgcactaccaaaaaaacccaaaggcacaatccaaactggtaactgcattaagggga
gaaatctttgatgttgcagttgatattcgcaaagattccccaacttatggcaaatgggtt
ggtgaaattctatcggagagcaatcacaagtccctttacatacctgaaggatttgcacat
ggattttgtgtaattagcaaaacagctgatgtgctttacaaggtaaataatgaatattcc
ccagaacatgaaaagggaataatatggaatgatccagacttgaaaattacctggccaatt
gaaaacccaattttatctcagaaagacacacagttatcatcactcaaagatgcagacaat
aactttacgtatcaatcacactag
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