Candidatus Nitrosopumilus sediminis: NSED_09225
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Entry
NSED_09225 CDS
T02303
Name
(GenBank) RNA-3'-phosphate cyclase
KO
K01974
RNA 3'-terminal phosphate cyclase (ATP) [EC:
6.5.1.4
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NSED_09225
Enzymes [BR:
nir01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.4 RNA 3'-terminal-phosphate cyclase (ATP)
NSED_09225
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Motif
Pfam:
RTC
Motif
Other DBs
NCBI-ProteinID:
AFS83635
UniProt:
K0BF07
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Position
1556642..1557664
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AA seq
340 aa
AA seq
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MDFLKINGAHGEGGGQIIRSAIALSCITKQAIHLENIRKNRKIPGLKPQHLTAITLLQKI
ANAKVVGANLGSTELKFIPGNLEDLDLEADVGTAGSIPLILQVLIPVVAVSRKKLNLKIK
GGTDVLWSPTIDYTQHVLREAYSRMGIKFSFELCKRGYYPKGGGKINLQINPSNVNSIIF
SKRKTNNIKLICSFSKLLREEIESKVNEIVKKLDVANFIVDVEIKSEEALDSGASLLIYS
VDDNSIIGLDGLYNKKTHNFDLDLDKFIEGYSIDDNLADMIVVPASLGNGKTIFQVKEIT
KHLETNLFVTSKITGCKYGIGKTSYGYEVIIEGISNSSIK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggattttttaaaaattaatggagcacatggtgaggggggtggacaaattattcgttca
gcaatagcactctcatgtattacaaaacaagcaattcatttagaaaatattagaaagaat
agaaaaattcctggattaaaaccgcaacatcttacagcaattactttacttcaaaaaatt
gcaaatgctaaagttgttggagcaaatcttggatcaacagaattaaaattcattccaggc
aatcttgaagatttggatttagaggcagatgttggtaccgctggaagcatcccattgatt
ttacaagttctaattccagtagttgcagtttcacgaaaaaaacttaatttaaaaattaaa
ggaggtacagatgttctttggagtccaactattgattatactcaacatgttttaagagaa
gcatattcaagaatgggaataaaattttcatttgaattatgtaaacgtggttattatcca
aaagggggtggaaaaatcaatttacaaataaatccatctaacgtaaattcaataatattt
tcaaaaagaaaaacaaataacataaaattaatttgttcattttcaaaattacttagagaa
gaaattgagagtaaagtaaatgaaattgtaaagaagttagacgttgcaaattttattgta
gatgtagaaattaaatcagaagaggcattagattcaggtgcatcattgttaatctatagt
gttgatgataattcaataataggattggacggattgtataataaaaaaacacataatttt
gatttggatcttgataaatttattgaaggttattcaatagatgataatttggcagatatg
atagttgttccagcaagtttaggtaatggaaaaacgatttttcaagtaaaagaaattaca
aaacatttagaaacaaatttgtttgttacatcaaaaattaccggctgtaaatacggtatt
ggaaaaacaagttatggatatgaagtgattattgagggaatttcaaactccagcatcaag
taa
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