Candidatus Nitrosopumilus sediminis: NSED_09350
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Entry
NSED_09350 CDS
T02303
Name
(GenBank) transcription termination factor Tfs
KO
K03057
transcription factor S
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nir03021
]
NSED_09350
Transcription machinery [BR:
nir03021
]
Prokaryotic type
Archaeal type
Basal transcription factors
TFS
NSED_09350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Cas12f1-like_TNB
DZR
Zn_ribbon_TiaS
zf-DNA_Pol
Zn_ribbon_6
DUF7351
zf-C2H2_ZN142
Motif
Other DBs
NCBI-ProteinID:
AFS83660
UniProt:
K0BF27
LinkDB
All DBs
Position
complement(1574452..1574769)
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AA seq
105 aa
AA seq
DB search
MKFCPKCEVKLKNSGSGLQCSKCGYTEGGEIKTTKKIPAEEEPDFSLLAFEGDEGEESNP
TVKIDCEKCGHDEAVGWMFQTRSADEPTTRFYRCQKCKYTWRDYT
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattttgccccaaatgtgaggtcaaattaaaaaatagtggttcaggcctacaatgt
tcaaaatgtggatacactgaaggaggagaaattaaaacaacaaaaaaaatccctgctgaa
gaagaaccagatttttcactacttgcatttgaaggagacgaaggagaagaatctaaccct
acagtcaaaatagactgtgaaaaatgtggacatgatgaagcagttggttggatgttccaa
actagaagtgctgatgaacctacaactagattttatcgttgccaaaaatgtaaatacaca
tggcgtgattacacataa
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