Candidatus Nitrosopumilus sediminis: NSED_09410
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Entry
NSED_09410 CDS
T02303
Name
(GenBank) class V aminotransferase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir00450
Selenocompound metabolism
nir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NSED_09410
Enzymes [BR:
nir01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NSED_09410
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NSED_09410
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
KYNU_C
Beta_elim_lyase
YgbB
Motif
Other DBs
NCBI-ProteinID:
AFS83672
UniProt:
K0BF20
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Position
complement(1582091..1583242)
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AA seq
383 aa
AA seq
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MNLASKDISSDFPISEKIYLNNASVSLMPTQSIEAMKEFLLTYNSIGPDSKDSEPFVTEK
LRNVRKTISKIISCQPDEVILTQSTTDGINFVANGLSFDNDSNIIIRGMSHEHHANFYPW
IKLEEKISIKNLPIDSNGFFKLDDLESFLDSNTKLVALSHVLYNTGSILPVEEIGKILHE
KVPFFIDAAQSIGCIGDIDVSKIQCDFMSFNGSKWLCGPMGTGLFYCNRKSSELLEPKTI
GGESAMIYDDSKIAYKELPDKFQTGFRNYVGIVGLESSANYLLKFGIKNIQEKNQNLSNL
LREELSKIPNIILYGPENQSDRTSIVSFNINGFDSQEIVDKLEKQNIVLAVREIMEKKIV
RASPHFFNTENQILKVIDAIKKL
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaatttagcatcaaaagatatttcatctgattttccaatttctgaaaaaatctatctc
aacaatgcatcagtatcactcatgcctacacaaagtattgaggctatgaaagaattcctt
cttacgtacaattctataggtccagactcaaaagattctgaaccttttgtaactgagaaa
cttcgaaatgtaagaaaaaccatttcaaaaattatttcttgtcaacctgatgaggtaatt
cttactcaaagtacaactgatggaattaattttgtagcaaatggattgtcttttgataat
gactctaacataataattcgtggaatgtcacatgaacaccatgccaatttttatccttgg
attaaactagaagaaaaaatttctataaaaaatctgccaattgatagtaatggttttttc
aaattagatgatttagaatcatttcttgatagtaatacaaaactagttgctcttagtcat
gttctatacaatacaggttctatattgccagtagaagaaataggaaaaattcttcatgag
aaagttccgttctttattgatgctgcacaaagtataggatgtattggagatattgatgta
tcaaagattcaatgcgatttcatgtcttttaacggatctaaatggctttgtggtcctatg
ggtacaggattattttattgcaatagaaaatctagtgaattattagaaccaaagacaatt
ggtggcgaatctgcaatgatttatgatgattcaaaaatagcatacaaagaattaccagac
aaatttcaaactggatttagaaattatgttggaattgtaggattagaatcatctgcaaat
tatttactaaaatttggaataaaaaatattcaagaaaaaaatcaaaatttatccaatctc
ttaagagaagaattatcaaaaattccaaatatcattttgtatggaccagaaaatcaaagt
gatagaactagtattgtttcatttaatatcaatggatttgattcacaagaaattgtagat
aaacttgaaaaacaaaatattgttttagctgttagagaaataatggaaaaaaagattgta
cgagcgtctcctcattttttcaatactgaaaatcaaattcttaaggtaattgacgctata
aagaaactatag
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