Candidatus Nitrosopumilus sediminis: NSED_09515
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Entry
NSED_09515 CDS
T02303
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nir03016
]
NSED_09515
Enzymes [BR:
nir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NSED_09515
Transfer RNA biogenesis [BR:
nir03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NSED_09515
Prokaryotic type
NSED_09515
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
AFS83693
UniProt:
K0BBP9
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All DBs
Position
1603597..1604496
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AA seq
299 aa
AA seq
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MKLVFLGTSAAQPTENRGLSCICLEREGEILMFDAGEAAQISFMKSSLGWNKKMKLFVTH
LHGDHCVGILGLLQTMSMQNRTETLEIFGPNGIEEFIGANIKILNFGLSFPVMITTIKEG
KIFEDEKFSIYVCKANHSITSFSYLFKEKDKPGKFNLEKAKELGIPEGKLWSELQNGHEI
IVNERKIRPDQVLGKKRPGKKIGISGDTMPTKDLEKFFENCDYLVFDSTFLDEEKLRAQE
TCHSTAKQAAILGKNAKVKNLILTHFSARYKDEEGHLKEAQKIHNSVITAKDLLEIEIK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgaaactagtattcttaggaacatcagcagcacagcctacagaaaatagaggattgtct
tgtatttgtttagaaagagagggagaaattttgatgtttgatgctggagaagctgctcag
atatcttttatgaaatcaagtttaggttggaataaaaaaatgaagttgtttgttacacat
ttgcatggagatcattgtgtaggaattttaggattattacaaacaatgtcaatgcaaaat
agaactgaaacattagaaatttttgggccaaatggtattgaagaattcattggagctaac
atcaaaatattgaattttggattatcatttcctgtgatgattacaaccatcaaggaaggg
aaaatttttgaagatgaaaaattttccatctatgtatgtaaagcaaatcattctataact
tcgttttcatatttatttaaagagaaggataaacctggaaaatttaatttagaaaaagca
aaagaattgggaattcctgaaggaaaattatggagcgaattacaaaatggtcatgaaatt
atagttaatgaaagaaaaattagacctgatcaagtattaggaaaaaaacgtccaggtaaa
aaaattggaatttcaggtgatactatgcctacaaaagatttagagaaattttttgagaat
tgtgattatcttgtatttgattcaacatttttggatgaagaaaaattaagagcccaagaa
acatgtcattccactgctaagcaagctgccatattggggaaaaacgctaaagtaaaaaat
ttaattctgacacatttttcagcaagatataaagacgaagaagggcatttgaaggaagca
caaaaaattcataattcagtaataactgctaaagatcttttagaaattgaaattaaatga
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