Candidatus Nitrosopumilus sediminis: NSED_09645
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Entry
NSED_09645 CDS
T02303
Name
(GenBank) DNA polymerase II small subunit
KO
K02323
DNA polymerase II small subunit [EC:
2.7.7.7
]
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NSED_09645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nir03032
]
NSED_09645
Enzymes [BR:
nir01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NSED_09645
DNA replication proteins [BR:
nir03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
D-family DNA polymerases
NSED_09645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_E_B
Metallophos
Metallophos_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AFS83717
UniProt:
K0BF68
LinkDB
All DBs
Position
complement(1625718..1627163)
Genome browser
AA seq
481 aa
AA seq
DB search
MKKELTLALNYALNKGFQIHPDAFKILEDVDVKKLEKIIKEIVREKTRQKLFQINQDDLE
TYLGIKDDLSLQNEIKIISDPTNKITSGEGVKGYNALFSSRFNKLKRIISDRPESKMLKS
AASLKNTKIEDDLYVCGLVSVRNSERNITKIVLEDPSGSFEGIIFDEELQKTAGTLLLDQ
FVMARIGSAKNSGYIIKDLILPDIPEQAKNKSESEAYAVFLSDLHVGSKYFMEEEFSDFV
SWISSPDPVAKKIRFVLIGGDVVDGVGIYPNQNKELVCQTIQEQLKKAEDLIDKIPKNVK
IIIMPGNHDPGRRALPQPAIPEKYNSGLWERENVFMVGNPAVVSLNGVKVSMFHGQSIDD
IVKTTPGLSYDRPTDVMRHLLRARHLSPIYGSQTPIAPEMEDLMVIQDIPDIFHVGHVHR
AQLDMYKGILLINSGSWQKQTPFQASVGMTPNPGIAILVNLKTFQVFHQNYSSNLDNVLQ
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggaacttactcttgcattaaactatgcattgaataagggatttcagattcat
cctgatgccttcaaaattttagaagatgttgatgtaaaaaaattagagaagataataaaa
gaaatagttagagagaaaactagacagaaattatttcaaattaaccaggatgatttggaa
acatatcttggaataaaagatgatttatcattacaaaatgaaattaaaataatctcagat
ccgacaaataagataacttctggagagggagtaaaggggtataatgcattattttcaagt
cgttttaacaagcttaaacggatcatctcagacagaccagaatcaaaaatgctcaaatct
gctgcgtccttaaaaaatacaaaaattgaagatgatttgtatgtgtgtgggctcgtttca
gttagaaattctgagagaaatatcacaaaaatagtccttgaagatccatcaggctcattt
gagggtattatttttgatgaggaattgcaaaaaactgcagggactttgctgttagatcaa
tttgtaatggccagaataggttcggctaaaaattcaggatacataataaaggatctaatt
ttacctgacataccagaacaggcaaaaaacaagtcagaaagtgaagcatatgctgtattt
ctctcagatttgcatgtagggagtaaatatttcatggaagaagagttttcagattttgta
tcatggatttcaagtccagatcctgttgcaaagaaaattcgatttgttctaattggaggt
gatgtggtagatggggttgggatatatccaaatcagaataaagaattggtttgccagaca
atccaagaacaattaaaaaaagcagaagatttgattgacaaaatcccaaaaaatgtaaag
atcataataatgcccggaaaccatgatcctggacgaagagcattaccacagccagccatt
cctgaaaaatacaattctggtttgtgggaaagagaaaatgtgtttatggttggtaatcct
gccgtggtttcattaaatggagttaaagtttcaatgtttcatggacaaagtatagatgat
attgtcaagactacaccaggtctaagttatgatagacctactgatgtgatgagacacctg
ctcagagcaagacatttgagcccaatttatggtagccagacacctatagcacctgaaatg
gaggatcttatggttattcaagatattccagatatttttcatgtcggtcatgttcataga
gcccagttggacatgtacaaaggaattttgttgataaattcaggttcatggcagaaacaa
acaccatttcaggccagtgttggaatgactccaaatccaggaatcgctattttggtaaat
ctaaaaactttccaagtttttcatcaaaattacagttctaatttagacaatgtcttgcaa
acttag
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