Candidatus Nitrosopumilus sediminis: NSED_09705
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Entry
NSED_09705 CDS
T02303
Name
(GenBank) transcription factor TFIIB cyclin-related protein
KO
K03124
transcription initiation factor TFIIB
Organism
nir
Candidatus Nitrosopumilus sediminis
Pathway
nir03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nir00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NSED_09705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nir03021
]
NSED_09705
Transcription machinery [BR:
nir03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NSED_09705
Prokaryotic type
Archaeal type
TFB
NSED_09705
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
QueH
DNA_pol_B_thumb
Motif
Other DBs
NCBI-ProteinID:
AFS83729
UniProt:
K0BE46
LinkDB
All DBs
Position
complement(1637211..1638131)
Genome browser
AA seq
306 aa
AA seq
DB search
MVENYSNDYDVKCQLDTCKTYPAITDSERGEIVCGGCGLILLQNMADASYENNGYTSEDF
MKMSRTGPASSLTMNDRGLSTVIGTNKDSTGKALSSKTKYEFNRLRTWDQRSKSRKTASL
SKAFTLLHGMKTKLGISDNVVENAAYIYRKVVSAKLTRGRTMASLISASLYAACRENNIP
RTLDDIADAGNVERRILSRDLRTIIKKLGMNLNQYDTTSFISKISNNMNLKEKTKRDAFE
ILRRCEKEQITAGKHPVAQAAASLYISCIMNGEKISQKKFSVESGVSDVTIRNRTILIKK
TLKLIE
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
gtggtagaaaattattcaaacgattatgatgtaaagtgtcaactcgatacttgcaaaacc
taccctgcaattacagattctgaaagaggagaaattgtttgtgggggttgcggtcttatc
ctattgcaaaatatggctgacgcatcatatgaaaacaacggttacacttcggaagacttt
atgaagatgtcaagaacgggtcctgcatcatcactaacaatgaatgatagaggactatca
actgtaattggcacgaataaagattctactggaaaagcattatctagcaaaacaaaatat
gagtttaacagactacgaacatgggatcaaagaagcaagtcaagaaaaactgccagttta
agcaaggcgtttactttacttcatggaatgaaaacaaaattaggaatctcagacaatgta
gttgaaaatgccgcatatatttacagaaaagtggttagtgcaaaactaacaagaggaaga
acaatggcctcattgatttcagcctcattatatgctgcatgtagggaaaataatatccct
agaacactagacgatattgcagatgctggaaatgtagaaaggagaatactttctcgagat
ttgagaaccataatcaaaaagcttggaatgaatcttaatcagtatgataccacttcgttc
atctcaaaaatttcaaacaacatgaatctaaaagagaaaacaaaacgagatgcatttgag
atactaagacgatgtgaaaaagaacagattactgctggaaaacatcctgtagcacaggct
gctgcatcattatacatttcatgtataatgaatggagagaaaattagtcaaaagaaattt
tcagtagagtctggagtaagtgatgtcaccatcagaaatagaactatcttgattaagaaa
acattaaagcttattgagtag
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