Nitratiruptor sp. SB155-2: NIS_0522
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Entry
NIS_0522 CDS
T00565
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nis
Nitratiruptor sp. SB155-2
Pathway
nis03030
DNA replication
nis03430
Mismatch repair
nis03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIS_0522
03430 Mismatch repair
NIS_0522
03440 Homologous recombination
NIS_0522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nis03032
]
NIS_0522
03400 DNA repair and recombination proteins [BR:
nis03400
]
NIS_0522
Enzymes [BR:
nis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIS_0522
DNA replication proteins [BR:
nis03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIS_0522
DNA repair and recombination proteins [BR:
nis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIS_0522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
BAF69636
LinkDB
All DBs
Position
complement(516371..516964)
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AA seq
197 aa
AA seq
DB search
MFWQKWFYRGEFKFLFEPYSGDEIVFIDCETTGLDPKNDEILSIACLPVKKDKILLSKAL
YLELKPQKDISAQSIKIHHLRACDLQGAMEPKEAIERVLYFIKNRPVAGYYVEFDVKMIS
KYTKKFFGFTLPNKQIEVSGLYYDYKQKAIPQGFIDLKFDTILKDLNLPKLKAHNALNDT
IMSAMIYLKLIKRRQYG
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgttttggcagaagtggttctatagaggtgagtttaagtttctttttgagccatacagt
ggtgatgagatagtttttatcgattgtgaaacaaccggactcgatccaaaaaatgatgag
attttatctattgcatgtttgccagtcaaaaaagataagatacttctctcaaaagcgctc
tatcttgagctcaaaccacaaaaagatattagcgcacaaagcatcaagatccatcactta
agagcttgcgatctgcaaggtgcgatggaaccaaaagaggcaattgagagagttttatat
tttatcaaaaatcgcccagtagcggggtattatgtggagtttgatgtaaagatgataagt
aaatataccaaaaagttttttggattcactcttccaaataaacagatagaggtttcggga
ctctattatgactataaacaaaaagcgataccgcaagggtttatcgatttgaagtttgat
acaatacttaaagatttgaatttacctaaactcaaagcacacaacgctctcaatgacact
ataatgagtgcaatgatttatcttaaacttataaaaaggagacaatatggataa
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