Nitratiruptor sp. SB155-2: NIS_1012
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Entry
NIS_1012 CDS
T00565
Name
(GenBank) ATP-dependent DNA helicase, UvrD/REP family
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nis
Nitratiruptor sp. SB155-2
Pathway
nis03420
Nucleotide excision repair
nis03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIS_1012
03430 Mismatch repair
NIS_1012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nis03400
]
NIS_1012
Enzymes [BR:
nis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIS_1012
DNA repair and recombination proteins [BR:
nis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIS_1012
MMR (mismatch excision repair)
Other MMR factors
NIS_1012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
DEAD
SYMPK_PTA1_N
Motif
Other DBs
NCBI-ProteinID:
BAF70122
UniProt:
A6Q3R3
LinkDB
All DBs
Position
complement(1025746..1027761)
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AA seq
671 aa
AA seq
DB search
MPLSTLNPEQLAAATAKSGYNLVIASAGTGKTSTIVARIAYLLQQGIEPKKILLLTFTNK
AAAEMIARVERVFGKKAKEIEAGTFHAVSYRWLKSLNPKVVLKQPKELKMLFKSIYEKRD
FSLVSDTKPYAASTLFDLYSLYQNSEFEISFGKWIGKRSDEQSVFGAVYDDIVQEYEEMK
DEYGFLSFNDLLLQAIRNKDALQTFYEVLVDEYQDTNNLQARFLESLRFESLFCVGDYDQ
SIYAFNGANIQIIAGFKQRYPNANIFNLSKNYRSTYYILDLANRVISNNERIFPKKLEVV
NQKSPKKPKLLAFSDLYEQYENIALRIKRSLTPKEEIAVIFRNNASADGIEAALREQGIG
CKRKGSQSFFEMKEIKALFDLVSILINPKDLLAFIHIFEYAKGVGASSAKEIFEALQRCG
DGDLVKGLKEPIDIYNPFEKKVRNQQLGLFDDCVQIGSKSRFVSLDVSEAIKAHPVLTYP
RMSEEAVLYLDTLLGLYKEMKRIKRPTTFIQLIKDSFIFDNIIKKIAQNRAKLKDGTIDQ
KLKDEAFERIQRRIALVHHLSQMYEDIYRFYNAMVLGGNEMAQGEGVQLLTVHASKGLEF
KEVYIVDLMEGRFPNLKLISKGGSIEEERRLFYVAVTRAKEILYLSFAKYDRLKKQEFLP
SRFLQEAGLIE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgccgctttcaacactgaatcctgagcagttggcagctgcgacagccaagtctggatat
aaccttgtgatcgcaagtgctggaacggggaaaacctccacgattgtggctcgcatagca
tatctattgcaacaaggtattgagccaaaaaagattttgcttttgacattcaccaataaa
gctgctgctgaaatgattgctcgggttgaacgtgtttttgggaaaaaagcgaaagagatt
gaggcaggaacatttcatgcagtcagttatcggtggctcaaatctttgaatccaaaagtt
gttctcaaacagccaaaagaattgaaaatgctatttaaaagtatctacgaaaaacgagac
ttttcgctagtttcagatacgaaaccttatgcggcatccacgctttttgatctctattcg
ctctatcaaaacagtgaatttgaaataagttttggaaaatggataggcaaaagaagtgat
gaacaatcggtattcggtgctgtatatgatgacatagtgcaagagtatgaggagatgaaa
gatgaatatggctttttgagtttcaatgatcttctgcttcaagccatcagaaataaagat
gctttgcaaacgttttatgaagtgcttgtagacgagtatcaagatacaaacaatctgcag
gcacgttttttggaaagccttcggttcgaatctctgttttgcgtaggggattatgaccaa
agcatctatgcgttcaatggagcaaatatccaaatcattgctggattcaaacagcgatat
ccaaatgccaatatatttaatctttccaaaaactatcgctcaacctactatattttagat
cttgcaaacagggttatttcgaataacgagcggattttccctaaaaagttggaagtagta
aaccagaaaagtcccaaaaaaccaaaactccttgcattttctgatctatatgagcagtat
gaaaacatcgctctgcgcatcaaaagaagccttacgccaaaagaggagattgccgtaatt
tttaggaacaatgcaagtgcggatggtatcgaggcagctttacgggagcaaggcattggt
tgtaaaagaaaagggagtcagagtttttttgagatgaaagagatcaaagcgctttttgat
cttgtttccattttgatcaatcccaaagatcttttggcttttatccacatttttgagtat
gcaaaaggagtaggagcgagtagtgcaaaagagatttttgaggccttgcagcgatgtgga
gatggggatcttgttaaagggttgaaagagccgatagatatatacaatccttttgaaaaa
aaggtccgtaatcagcaactaggactttttgatgattgtgtgcaaataggaagtaaaagt
cgatttgtttctttggatgtgagtgaagcgattaaagcgcatccagtattaacctatcca
cgaatgagcgaggaggcggtactatatttggatactcttttggggctctataaggagatg
aaaaggatcaagcggcccacaacttttatacaactcatcaaagattctttcatatttgat
aatatcatcaaaaagattgcccaaaatagggcgaaactgaaagatgggacaattgatcaa
aaattgaaggatgaagcgtttgaaagaattcagagacgaattgcattagtgcatcatttg
tcccagatgtatgaggatatctaccgattttacaatgcaatggttctaggcggaaacgag
atggcacaaggagaaggtgttcagctccttactgttcatgcgagcaagggcttggagttc
aaagaagtgtatatcgttgatctcatggaagggcggtttccaaatctaaaacttatttca
aaagggggcagcattgaggaggagaggagactcttttatgttgccgtaacacgggcaaaa
gagattttgtatctaagttttgcaaagtacgatcgattaaaaaagcaggagtttttgccc
agccgttttttacaagaggccgggctcattgaatag
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