Nitratiruptor sp. SB155-2: NIS_1191
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Entry
NIS_1191 CDS
T00565
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
nis
Nitratiruptor sp. SB155-2
Pathway
nis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIS_1191 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nis03400
]
NIS_1191 (uvrA)
DNA repair and recombination proteins [BR:
nis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIS_1191 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NIS_1191 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_29
nSTAND1
AAA_21
AAA_16
AAA_25
RsgA_GTPase
nSTAND3
AAA_33
DnaJ_CXXCXGXG
APS_kinase
AAA_23
ATPase
Viral_helicase1
BCA_ABC_TP_C
HUTI_composite_bact
CobN-Mg_chel
Motif
Other DBs
NCBI-ProteinID:
BAF70300
UniProt:
A6Q491
LinkDB
All DBs
Position
complement(1210622..1213441)
Genome browser
AA seq
939 aa
AA seq
DB search
MKNHIEIFGAKQHNLKNIDLKIPKNALVVFTGLSGSGKSTLAFDTLYAEGQRRYIESLSS
YARQFLDRLDKPDVDKIEGLTPAIAIEQKTTSKNPRSTVGTITEIYDYLRLLYARIGQQH
CHLCGKPISQMNPQDIIDEVLKLPEGAKMVITAPLIKEKKGSFTDLLEGLRQKGYVRAMI
DGVMVRLDEEIELSKTKKHTIKAVVDRVVMKEENRSRIAQDIEKALQTSYGEVEIDILNG
DELGIKSHFHYSEHLACFDCKVSFEPLEPLSFSFNSPKGACEECDGLGIRYTLDLQKIID
QHKSIEKGAIKFLYGYNKSYYYKFLMAFCEQEGIDTTVAYEELPEHQKKAILYGMGQKVS
FRWKSHNLVREWPGVVKIAYDMFRDEKELGEYMSEKVCDKCGGHRLKQESLAVRVAGKGI
ADILDMPIEEAYDFFANESNFSYLSEQKAAIAAPILKEIRERLFFLVDVGLGYLSLGRDA
RTISGGEAQRIRIASQIGSGLTGVMYVLDEPSIGLHERDTLKLIRTLKNLQKKGNTVIVV
EHDKETIESADFIVDIGPGAGKYGGEVVFAGSVDELKKSSTLTARYLSGAKKIEYFHRRP
QSEWLHVKYVTINNIKDLSVSFPLRNLVAVTGVSGSGKSSLVLQTLLPVAKEALNHAKKV
RKVSGVTIEGLEHLDKVIYLDQSPIGRTPRSNPATYTGVMDEIRALFAKTKEAQIRGYGP
GRFSFNVKGGRCEKCRGEGELKIEMHFLPDIMIKCDACKGKRYNEQTLEVHYKGKNIADV
LAMSVDEALEFFKNIPKIYQKLKTLQDVGLGYITLGQNAVTLSGGEAQRIKLAKELSRKD
TGNTLYILDEPTTGLHFADVDRLIKVLHHLVELGNSVIVIEHNLDVIKNADYIIDMGPEG
GIRGGKVIATGTPEEVAAQHKETGSFTGEFLAKELKRER
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcatatagaaatttttggagccaagcagcacaatctcaaaaatattgatcta
aaaattccaaaaaatgcactcgttgtctttacaggactttcaggaagcggaaagtccaca
ctcgcttttgacacactctacgctgaaggccagaggcgatatatagaatcactttccagt
tatgcaagacagtttctcgatagactcgataaacctgatgtggataaaatagaggggctg
acgcctgcaattgcgattgaacaaaaaaccaccagtaaaaatcctcgctcgactgttgga
acgatcaccgagatttacgactatctcagactcctttatgcaagaatcggtcaacagcat
tgccacctttgtggcaaacctatttcgcaaatgaatccacaagatatcatagatgaagtc
cttaaactgccagaaggtgccaaaatggtcatcaccgcacctttaattaaagagaagaag
ggaagctttaccgatcttttggagggacttcgccaaaaagggtatgtacgggccatgatc
gatggtgtgatggtgcgattggatgaggagatagagctgagtaaaacaaaaaagcacacc
attaaagcggttgtggatagagtggtgatgaaagaggagaatcgaagcaggattgcccaa
gatatcgaaaaggctttgcaaacaagctacggggaggtggagatcgatatcctcaatggg
gatgagcttggaataaagtcgcattttcactatagcgaacatcttgcatgttttgattgt
aaagtgagttttgaaccattggagcctttgagcttttcgtttaattctccaaaaggagcc
tgtgaggagtgtgatgggcttggtattcgctatacgctggatcttcaaaagatcatcgat
cagcacaaatcgatcgaaaaaggtgctatcaagtttttgtatgggtataacaaaagctac
tactataagttcttgatggctttttgtgagcaggagggcatcgatacaactgttgcctat
gaagagttgcctgaacatcaaaaaaaagcgattttgtacggaatgggacaaaaggtctca
tttagatggaaaagccataaccttgttcgggagtggccaggcgttgtaaaaattgcctat
gatatgttccgggatgaaaaagagcttggcgaatatatgagtgaaaaggtgtgtgacaag
tgtggcggtcacagactcaagcaggagagtttagctgttagagttgccggaaaggggata
gccgatatcctggatatgccgatagaagaggcgtatgatttttttgctaatgagagcaac
ttctcctatctctctgaacagaaggcggcaatcgctgctcccattttaaaagagattcga
gagcggctctttttcttggtggatgttggacttggatatctctctttgggaagggatgcc
cgaaccatcagtgggggagaggcgcaacggatccggattgcgagccagattggaagcgga
ctaaccggtgtgatgtatgttttggatgaaccaagtatcggtttgcatgaaagagatacg
ctcaaacttattcgaacactgaaaaatcttcaaaaaaagggcaacactgtcattgtcgtg
gaacatgacaaggagacgatagagtcagccgatttcatcgtggatatcgggccgggtgcc
ggaaaatatggaggtgaagttgtatttgcaggaagtgtggatgagctgaaaaagagttct
actctcactgcccggtatctcagcggtgccaagaaaatagagtattttcatagacgtccg
caaagtgaatggcttcatgtaaaatacgtgactatcaataacatcaaagatttgagtgtt
tcctttcctttaagaaatctcgtagcagttactggagtgagtggcagcgggaaaagctcg
ctagttctgcaaacccttctgcctgtagcgaaagaggctttgaatcatgcgaagaaggtt
cgaaaagtaagtggtgtaacgatagaggggctggagcatctcgataaagtgatctatctg
gatcaatcccccataggacgaacgccaagaagcaaccctgcgacatatacaggggttatg
gatgaaattcgagccctttttgccaaaacgaaagaggcacagatcagaggatatgggccg
ggaagatttagtttcaacgtcaaaggtggtcgatgtgagaagtgtcggggtgagggggaa
ctgaaaatcgaaatgcactttttgcccgatatcatgatcaagtgcgacgcatgtaagggg
aaacgatacaatgaacagacgctagaagtgcactataaagggaaaaatatcgccgatgtt
cttgccatgagcgtagatgaagcgctggagtttttcaaaaacattccaaaaatctatcaa
aaactcaaaaccttgcaagatgtcggtcttggatatattactcttggacaaaacgccgtg
actttgagcggaggggaagcacagagaataaaacttgccaaggagctcagccggaaagat
acgggcaatacactctacattttggatgagccgaccaccgggcttcattttgccgatgtg
gatagactcatcaaagttttgcatcatttggtagaattggggaacagcgtcattgtgatt
gagcacaatcttgacgtgataaaaaatgcggattatatcatcgatatgggtcctgaaggc
ggtattcgcgggggtaaagttattgcaacggggactccggaagaggttgctgcacaacat
aaagagacaggcagttttacgggagaatttttagcgaaagagttgaagcgtgaaagatga
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