Nitratiruptor sp. SB155-2: NIS_1230
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Entry
NIS_1230 CDS
T00565
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
nis
Nitratiruptor sp. SB155-2
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nis03016
]
NIS_1230
Enzymes [BR:
nis01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
NIS_1230
Transfer RNA biogenesis [BR:
nis03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NIS_1230
Prokaryotic type
NIS_1230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
MesX
Motif
Other DBs
NCBI-ProteinID:
BAF70339
UniProt:
A6Q4D0
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All DBs
Position
complement(1250829..1251788)
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AA seq
319 aa
AA seq
DB search
MRSYLTKESVGFRFRPSVEDFFVEEIPLQWKGKGGYLVLKIEKKGLSTWDLITIFKRELG
DVKIGYAGLKDKYATTIQYISLHKNFSKSLKRFKHPSIKIVSTTLHDRPINMGDLIGNRF
IMRVHNVSDFQKLQELAYWTAKHGMPNYFGHQRFGREGLQKAKTFVEEDYFTKDKKMQKF
LLFIYQSDLFNRWLDERVRKSSNGFRLLSGEVYRKGKKFFVSDTILQEPFLQKEIVPTGL
LPGNRVLRAKGEAKVIERKYDALLPLRGERRDAIVYPKILDIKREWDGVLLEFTLPKGSY
ATIFLENLAKKPMSYKGFV
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagctacttaaccaaagagagtgtcggatttcggttccgtccttccgtcgaagat
tttttcgttgaagagatccccttgcagtggaaaggtaaggggggatatcttgttttgaaa
atagagaaaaagggtctttctacatgggatttgatcactattttcaaaagagaacttggt
gatgtgaaaatcgggtatgcagggctcaaagacaaatacgccaccacaatccaatatatt
tctctccataaaaacttttccaaatcactgaagcgattcaaacatccatccattaaaatt
gtttcaacgacgctgcatgatagaccgatcaatatgggcgatttgattggtaatagattt
ataatgcgagtgcataatgtttctgatttccaaaaactacaagaacttgcttattggact
gcaaaacacggaatgccgaactattttggtcatcagcgttttggaagagagggtttgcaa
aaagcgaaaacttttgtagaagaagactatttcaccaaagataaaaagatgcaaaagttt
ttgctttttatctatcagagcgaccttttcaacagatggctcgatgagcgagttcgaaaa
agcagcaatggcttcaggctgttatcgggagaagtgtatagaaaaggtaagaaatttttt
gtttcggatacaattttacaagagccctttttgcaaaaagagatcgttcccacagggctt
ttgccagggaatagagtgcttcgtgcaaagggtgaagccaaagtaatagaaaggaaatat
gatgcactgctgcctcttagaggcgaaaggcgcgatgctatagtctatcccaaaattttg
gatatcaaaagagagtgggatggcgttttgttggaatttacgctcccaaaaggaagttat
gctaccatttttctcgaaaatcttgctaagaagccgatgagctataaaggatttgtatga
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