Nitratiruptor sp. SB155-2: NIS_1651
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Entry
NIS_1651 CDS
T00565
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nis
Nitratiruptor sp. SB155-2
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nis03032
]
NIS_1651 (topA)
03400 DNA repair and recombination proteins [BR:
nis03400
]
NIS_1651 (topA)
Enzymes [BR:
nis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NIS_1651 (topA)
DNA replication proteins [BR:
nis03032
]
Prokaryotic type
DNA Topoisomerases
NIS_1651 (topA)
DNA repair and recombination proteins [BR:
nis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NIS_1651 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF7340
DNA_ligase_ZBD
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Zn_ribbon_PaaD
Zn_ribbon_19
DUF7129
Zn_ribbon_recom
Zn_ribbon_FGT1_2
Motif
Other DBs
NCBI-ProteinID:
BAF70757
UniProt:
A6Q5J8
LinkDB
All DBs
Position
1664688..1666886
Genome browser
AA seq
732 aa
AA seq
DB search
MGKNLIIVESPAKARTIKNFLGKEYEVIASKGHIRDLPKSSFGIKIEEDKFIPQYRVDKE
HSQITKQLKELAKKADTVYIATDEDREGEAIGYHIAEAIGKKPQELPRIVFHEITKSAIQ
KALQNPRTIDMNRVNAQQTRRLLDRIVGYKLSPLLSSKIQRGLSAGRVQSAALKLVVDKE
REIQAFKPQEYWSIDAIFNDTIEAALYEYMNKKIGKMDIKNEKEAQAIVDQVKNESFVVA
KIEKKKRITKSPAPFMTSTLQQTASSKLGFSPKKTMMIAQKLYEGVQTPKGITGVITYMR
TDSLNIAKEAQEAARDLIKKQFGEKYLPKKPKEYATKSKGAQEAHEAIRPTMLDFTPEVA
KNYLSADELKLYTLIYNRFLASQMEDAVFETQTIYFKSPSATFKASGRKLIFDGFYKVLG
NEDKDKLLPDLKEGEEAKLTKIEANQHFTEPPARYTEASLIKMLESLGIGRPSTYAPTIA
LLQARNYIELEKRAIKPTEIAFKVIEVLEKHFPEIVDSSFTAKMEEELDEIAEAKKDWQK
VLKAFYDPFIELIEKGKKEIKSQKVAIPVGRNCPECGAELVKRKGRFGEFIACSAFPKCK
YTEQIESEEKGPQESNEVCEKCGSPMVVKQGPRGSFLACSAYPKCKNTKPLAKNEPKKLD
VKCPECGGEIVERFSRRGKFYGCSNYPKCTFVSKFEPVDKQCSECGYMMAKRTYRNKEVY
ECIKCKHREEVQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaatctaattatcgtcgaatcaccggcaaaagcgagaacaatcaagaatttt
ttaggcaaagagtatgaagttatcgcctccaaaggtcatatccgagatctgccaaaaagc
agtttcggcatcaagatagaagaggacaagttcatcccgcaatatcgcgtggacaaagag
cactcccaaatcacaaaacagctcaaggagcttgctaaaaaagcggacacggtctatatc
gcaacggatgaagacagagaaggagaggcgattggataccatatcgccgaagcgatcggg
aaaaaaccgcaagagcttccgagaatcgtctttcacgagatcacaaaatcggctatccaa
aaagctttgcaaaatccacgtaccatcgatatgaacagggtcaatgcccagcagacaaga
cgactactggatcgaatcgtgggatacaagctcagcccgcttctttcatccaaaatccaa
agaggtctgagtgctgggcgggttcaaagtgcggcactcaaacttgtagttgacaaagag
cgagagatccaagctttcaagcctcaagaatactggagtatcgacgctattttcaacgat
accatcgaagctgctttgtatgagtatatgaacaaaaaaatcggcaaaatggatatcaaa
aatgaaaaagaggctcaagcaatagtcgatcaagtcaaaaatgaatcctttgtcgttgcc
aaaatagagaagaaaaaacgcatcaccaaatcccctgctccttttatgacttcaacgctg
cagcagaccgcttcctcaaagctcgggttcagtcctaaaaagacgatgatgatagcccaa
aagctctatgaaggtgttcagacgccaaaaggaatcactggcgttatcacctatatgcga
acggatagtctcaatatcgcaaaagaggcgcaagaagcagctagagacctcattaaaaag
cagtttggagaaaagtatcttcccaaaaaaccaaaagaatatgcaacaaaaagcaaaggt
gctcaagaggcacacgaggcgatccgtccaacgatgctcgactttaccccagaggtggcc
aaaaactatttgagtgcggatgaactcaagctctacactctcatctacaaccggtttctt
gcttcacagatggaagatgctgtctttgaaacacaaaccatctactttaaaagtccaagc
gccactttcaaagcaagtggaagaaaactcattttcgatggattctacaaagttttgggc
aacgaagacaaagacaagctccttccggatctcaaagagggtgaagaggcgaaactcacc
aaaatagaagccaaccagcacttcacagaaccccctgccagatacacagaagccagtctt
atcaaaatgctcgaatctcttggtatcggccgtccatctacctatgcaccgacaattgcc
ctgttgcaagcacgtaactatatcgagcttgaaaaacgggccatcaagccgactgaaatc
gctttcaaagtaatcgaggtactagaaaagcatttccccgagattgtagacagctcgttt
actgctaaaatggaagaggaactggatgaaatagccgaagccaaaaaagattggcaaaaa
gtattaaaagccttctatgatccgtttatagagctcatcgaaaaagggaaaaaagagatc
aaaagccaaaaagtggctattccagttggaagaaactgtcctgaatgtggagcggagctc
gtcaaaagaaaggggcgttttggagaattcatcgcttgtagcgcttttccaaaatgtaaa
tacaccgaacagatagaatctgaagaaaaagggcctcaagagagtaacgaagtttgtgaa
aaatgtggctcgccgatggtcgtcaaacaaggacctcgaggatcttttctggcttgcagt
gcctatccgaaatgtaaaaacaccaagcccttggcaaaaaacgagcccaaaaagctggat
gtgaaatgtcccgagtgcggaggagaaattgttgagcgattcagcagacggggaaaattt
tatggttgctccaactatccaaaatgtacatttgtctcaaaatttgaaccggtggataaa
cagtgcagcgaatgcggatacatgatggcgaaacggacatatcgcaacaaagaggtgtat
gagtgtatcaaatgtaaacaccgagaggaagtgcagtga
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