Nitrosomonas sp. AL212: NAL212_1076
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Entry
NAL212_1076 CDS
T01443
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
nit
Nitrosomonas sp. AL212
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nit01011
]
NAL212_1076
Enzymes [BR:
nit01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
NAL212_1076
Peptidoglycan biosynthesis and degradation proteins [BR:
nit01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
NAL212_1076
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
DUF2153
TMF_DNA_bd
Motif
Other DBs
NCBI-ProteinID:
ADZ25986
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Position
994287..995579
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AA seq
430 aa
AA seq
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MIIKRNVISAILFLLISAACSFLSFNAFADRLLHDKAQHSSNLWERIRNGFALALPPSPN
NKAVRKIALNYIQNPQAFNSIVANGERYLFYIMEEVERRGMPMEIALLPIIESAYDPLIK
SNSQTAGLWQFIPETGRILGLEQNVWHDDRRDIVASTQAALDYLQYLYQKFDNWKLALAA
YNLGEGAVSKILAKHIHKGRAVNFYDVNLPVEVKHYVYKILAIKDIVANAKKYGIQLRSI
PNRPYFDTVKIHEHIDIPLVTRLANISEIEFTALNPAYNRYVIKVSNEPRTLLIPREKKE
IFVRNLETYHDPRVSWQFYRVKKGEKISEIATRHETTIKQLQTINGIARNKNLTLGQKIL
VPQIVVGNQITRSSWKKQMQRNQSVVYVVKKGDTLYEIAKRYRTTVDQIKHWNNSDENLS
IGQKLVMLRG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgattataaaaagaaatgtcatttctgctatattattcttactgatttctgctgcgtgt
tcttttttatcgtttaatgcatttgcagaccggttattgcacgacaaagctcagcatagt
tcaaatttgtgggaacgtattcgtaacgggtttgcattggcacttccaccttccccgaat
aataaagcagttcgcaagattgcgctcaattatatacaaaatccccaggcatttaacagc
attgtcgcaaatggtgaacgttatttgttttatataatggaggaagttgagcgccgggga
atgcctatggaaatagcattgctaccgataatagaaagcgcttatgatcctttgataaaa
tcaaatagccaaacagcaggactgtggcaatttattccggaaacagggcgaatcctgggc
ttggaacaaaatgtttggcatgatgatcggcgtgacatcgtggcatctactcaagcggct
cttgattatcttcaatatctgtatcaaaaattcgataattggaagctggcattagcagct
tataatctgggcgaaggcgctgtaagtaaaattctggcaaagcacatacacaaaggaagg
gctgttaatttttatgatgtaaatctaccggttgaggtaaagcattatgtttacaagata
ttggccataaaggatattgttgccaatgccaaaaaatatggtatacagctacggtcaata
cctaatcgcccgtattttgatactgtaaagattcatgaacacatcgatattccgctcgtt
acacgccttgctaatatctccgagattgaattcacagcattaaatccggcttataatcgt
tacgttatcaaagtcagtaacgagcctcgtactttattgatacccagagaaaaaaaagag
atatttgttagaaatctggaaacttatcatgatcctcgagtttcatggcaattttatcga
gtcaagaaaggagaaaaaattagtgagattgctacccggcatgagactacgataaaacag
ctacaaacaatcaatgggattgctcgaaacaaaaatcttacactaggccagaaaatatta
gtgcctcaaattgtggtaggaaatcaaataactcgatcatcctggaagaaacagatgcaa
cgtaaccaatctgttgtttatgttgtgaaaaaaggggataccttgtatgaaattgcaaag
cgctatcgcacaacagttgatcaaattaaacactggaataatagcgatgaaaatttgtca
ataggtcagaaactggtcatgctaagaggctaa
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