Nitrosomonas sp. AL212: NAL212_1360
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Entry
NAL212_1360 CDS
T01443
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAL212_1360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nit03019
]
NAL212_1360
03016 Transfer RNA biogenesis [BR:
nit03016
]
NAL212_1360
Enzymes [BR:
nit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NAL212_1360
Messenger RNA biogenesis [BR:
nit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NAL212_1360
Transfer RNA biogenesis [BR:
nit03016
]
Prokaryotic type
tRNA degradation factors
NAL212_1360
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_RRP5
OB_RRP5_4th
KH_KhpA-B
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADZ26256
LinkDB
All DBs
Position
complement(1275723..1277852)
Genome browser
AA seq
709 aa
AA seq
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MKSIKKSITYGRHQLTLETGEIARQAHGAVVVTMDDTVVLVTVVGAKNIKPGQDFFPLTV
DYQERSYAAGRIPGSFFKREGRPSEKETLTSRLIDRPIRPLFPEGFYNEVQIVATVMSAD
NEIDPDIPSIIGTSAALTLSGIPFDGPLGAARVGYINNEYVLNPTTSELKDTQLNLVVAG
TQHAVLMVESEAIELSEEVMLGAVTYGHEQMQIVIDAINEFADEAGVTAWDWTPPAKDSA
FEEKIAMMAEADLRQAYKIKQKQTRSEAIKTTRERISNELGVGTENGPELQAFMEAFFSL
ESKIVRNQILDGEPRIDGRGTRTVRAITIRNGVLPRTHGSALFTRGETQALAIATLGTAR
DEQKIDSLQGDYNERFILHYNMPPYATGEIGRVGTPKRREIGHGRLAKRALVAVLPPPEE
FGYSLRVVSEITESNGSSSMASVCSGCLALMDAGVPLKAHVAGIAMGLIKDGNRFAVLTD
ILGDEDHLGDMDFKVAGTEKGITALQMDIKIQGITKEIMHAALIQAHEGRMHILQIMKQA
LPSTREDISIHAPRIIKLKINPEKIRDVIGKGGAVIRALTEETGTTIDITDDGQVTIACV
SAEGGELAKKRIEDITAEVEVGKIYDGVVLKLLDFGAIVSVLPGKDGLLHISQIANERVN
NVSDHLNEGQQVRVKVLEADDKGRLRLSMKAVSSDENPSDSDPMTKEES
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatctataaagaaaagcattacctacggacgacatcaacttacactggaaacaggt
gaaatagcaaggcaggcacatggtgccgtagtagttacaatggatgatacggtagtactt
gtgaccgtagtgggtgcaaaaaacataaaacctggtcaggatttttttccacttactgtc
gactatcaggaaagatcttatgcggcgggtagaataccaggaagcttctttaagcgtgaa
ggacgcccatccgagaaagaaacactaacttcgcgattaatcgatcgcccgatccgccca
cttttccccgaaggtttctataacgaggttcaaatagtagctactgttatgtcggctgac
aatgaaattgaccctgatattccttcgattattggcacatctgccgcattgactctctct
ggaattccttttgatggccccctcggtgcagctcgcgttggctacatcaacaatgagtat
gtcttaaatccaactacctcagaacttaaggatacacaattaaatctggtcgttgcagga
acgcaacacgccgttttgatggttgaatccgaagcaatagagttatcggaagaagtaatg
cttggtgccgtgacatatggccatgagcaaatgcagatagttattgatgcaatcaatgag
tttgctgatgaggctggtgtaactgcatgggattggacgccacctgcaaaagacagcgca
tttgaagaaaaaattgccatgatggctgaagctgatttacggcaagcatacaaaataaaa
caaaaacaaacgcgttctgaagcaataaaaacaactagagagcgtatatcgaatgaactt
ggagtcggcacagagaacgggccggaattacaagcttttatggaagcattcttttcactg
gaatcaaaaatcgtccgcaaccaaatactggatggggaacctcgcattgacggtcgaggt
actcgcacagtcagagctataacgattcgtaatggggtattaccccgcactcatggctca
gccctctttactcgcggcgaaacacaagcacttgcaattgccactttaggcactgctcgt
gacgagcaaaaaattgattcattacaaggtgattataatgagcgatttatactccactat
aatatgcccccttatgccacaggtgaaataggtcgtgttggcactcccaaacgccgtgaa
atcgggcatggacgcctggcaaagcgcgctcttgttgctgttctccctccccctgaagag
ttcggctattctttgcgagttgtctctgaaatcactgaatccaacggctctagctcaatg
gcatcggtttgcagcggctgtcttgcactaatggatgccggagtaccactaaaagctcat
gttgcgggtattgccatgggattaatcaaggatggaaaccgcttcgcagttcttacggat
atactcggcgacgaagatcatcttggtgatatggattttaaagtcgccggtacggaaaaa
ggtattaccgcactgcaaatggacattaagatacaaggcatcaccaaagaaattatgcat
gcggcactgatacaagctcatgaaggaaggatgcatattctgcaaattatgaaacaggcc
ctaccatcaactcgcgaagatatttcgatccatgcaccacgtattataaaactcaaaatt
aatccagaaaaaattcgtgacgtaattggtaaaggtggtgctgtcattcgtgcgcttacg
gaagaaacaggtactaccattgatattaccgatgatggtcaggtaacaattgcatgcgtc
agtgccgaaggtggcgagcttgctaaaaaacgtattgaagatattactgcagaagttgaa
gttggaaaaatctatgatggtgtagttctgaaactgcttgacttcggagcaatagtaagt
gtccttcctggtaaagatggattgcttcatatttctcaaattgcgaatgaacgagtcaat
aatgtttccgatcaccttaatgaaggtcaacaggtacgcgttaaagttcttgaagctgac
gacaaagggaggttaaggctaagtatgaaagctgtatcttctgatgaaaatccgtctgat
tctgatcctatgacgaaggaagaatcatga
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