Nitrosomonas sp. AL212: NAL212_1443
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Entry
NAL212_1443 CDS
T01443
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAL212_1443
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nit03400
]
NAL212_1443
Enzymes [BR:
nit01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NAL212_1443
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NAL212_1443
DNA repair and recombination proteins [BR:
nit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NAL212_1443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
ADZ26330
UniProt:
F9ZIA7
LinkDB
All DBs
Position
1373807..1374637
Genome browser
AA seq
276 aa
AA seq
DB search
MPELPEVETTGRGIAPHVTGQVIANVIIRNSMLRWPIPENLPALLPGLTIQTVTRRAKYL
LLDCGKGALIFHLGMSGSLRVLLPELIQLPEFPRKHDHFDLILNNQTVLRLHDPRRFGAV
LWHVGNIAQHPLLMNLGPEPLTADFSAQYLFRETRGLRACIKQTLMNSRIVVGIGNIYAN
EALYLAGINPKVTAGRIGIGRYEKLVQAVKHTLQLAIEAGGSSLRDFVHSDGTRGYFQQQ
YWVYGRSGKRCKQCSNIIKQIKQGQRSSFYCSGCQH
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgagacaacaggtcgtggtattgccccgcatgtgactggt
caagtgattgcaaacgtaattattcgtaattcgatgttacgttggccaataccggaaaat
ttacctgcattattgccgggattgacgattcaaacagtgacgcgccgggctaaatattta
ctgttggattgcggtaaaggagcgctgatttttcatttgggtatgtcaggcagtttacgt
gttttattgccagaattaatacaattgccggaattcccacgcaagcatgatcattttgat
ttaattcttaataatcagactgtactcagactgcatgatccgcgtcgctttggtgccgtg
ttatggcatgtagggaatattgcgcagcatccgcttctgatgaacttgggtccggagccg
ttgacagcagattttagtgcgcaatatttatttagagaaaccaggggattgcgagcgtgt
atcaagcaaaccctgatgaatagtcgtatagtagtgggcattggtaatatttacgcaaat
gaagctttgtatttagccggaatcaatcctaaagtaaccgctggcagaattggaataggg
cgttatgaaaaattggttcaagcggtcaagcatactttgcagttggcaatagaagctgga
ggtagcagtttgcgtgattttgtgcacagtgatggaacccgggggtattttcaacagcaa
tattgggtttatggacgtagtggtaaacgatgcaagcaatgttcaaatataatcaagcag
ataaagcaaggccagcgttccagtttttactgttcaggttgtcagcattga
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