Nitrosomonas sp. AL212: NAL212_1467
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Entry
NAL212_1467 CDS
T01443
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03030
DNA replication
nit03430
Mismatch repair
nit03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAL212_1467
03430 Mismatch repair
NAL212_1467
03440 Homologous recombination
NAL212_1467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nit03032
]
NAL212_1467
03400 DNA repair and recombination proteins [BR:
nit03400
]
NAL212_1467
Enzymes [BR:
nit01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NAL212_1467
DNA replication proteins [BR:
nit03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NAL212_1467
DNA repair and recombination proteins [BR:
nit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NAL212_1467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
ADZ26352
UniProt:
F9ZIT4
LinkDB
All DBs
Position
complement(1397536..1401039)
Genome browser
AA seq
1167 aa
AA seq
DB search
MPIKPAFIHLRMHSEYSILDSTIRIHDVVKKAVADQMPALALTDLANLFGLVKFYQAAYK
NGIKPILGCDIWIANESDRSKPIRLLVLCQTHAGYLLLSRLLSRAYRENQFQNRAEIKES
WLQPDDWGTEGLIALSGARLGDIGLSLLQNNILQAEIQVQKWATLFPDRFYLEIQRDGHA
NEAMLVQHSLALAKKFNLPVVATQAVQFLNVEDYQAHEARVCIAEGYILEDKRRQKNFTQ
QQYFKTQTEMTQLFADIPAALTNTIEIAKRCNLILELGVNRLPLFPTPNNESLDQYLRSQ
AELGLIKRMTSLFPDAEMRNDRITQYQSRLEFEVNTIIQMGFAGYFLIVADFINWAKHNN
VPVGPGRGSGAGSLVAYSLGITDLDPLRYDLLFERFLNPERISMPDFDIDFCQDRRELVI
EYVKQRYGIGKVSQIATFGTMAAKAVIRDIGRVMDLPYNFVDQLAKLIPFEIGMTLKKAR
QLEPQLNQRAEEEDVRNLLELAESLEGITRNVGMHAGGVLIASSEITDFCPIYCTESGDS
VVSQLDKDDVEKIGLVKFDFLGLRTLTILDRAVGYIRQLHPNIDSPESRLFSLETLPLDD
DATYALMRKGNAVGIFQFESRGMIDLLQKAKPDHFEDIIALVALYRPGPMDLIPEFIDRK
HGRKQIEYLDPRLEPILGPTYGIMIYQEQVMQIAQVIGGYSLGSADLLRRAMGKKKVEEM
AQQRDIFVSGAINNGLSEDKATELFGLMEKFAGYGFNKSHAAAYALIAFQTAYLKAHYPA
EFMAACLSADMDDTDKVHIFVEDSIANGIIILPPDINLSDYRFIPVDSKNIRFGLGAVKG
TGESAVNSIIAVRRQTGPFTDLFDFCNRVDRRIANRRVMESLIRVGAFDIINPNRASLMA
SVGLAIESAEQTSQSSNQINLFGETSSDAQMQPQLIQAESWHDREKLHQEKIGLGYYFSG
HPFDTYASELKHFICTRLDRLNPQREPQLLAGIIHSIRTQMTRRGKMGVINLDDGKARIE
VVIFSELFDANRTWLKEDQLLIAEAKISMRAYNGDEEDGLRITAERLYNLAAIRSRFAKQ
IKIYCNLLTLDQLSGLKKLLIPFSTQTQKSIADFCPITVVYRNDRASGELELGNDWRVHL
HEDLLQSLNTHFRTENVEIVYSKNNKS
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgcccatcaaaccagcttttattcatttacggatgcacagcgaatattccattctggat
agcaccatacgtattcatgatgtcgttaaaaaagctgtagccgaccaaatgccggccctg
gcattgactgatcttgccaatcttttcggattggtaaaattttaccaagctgcatacaaa
aacgggattaaaccaattctcggatgtgatatctggatcgcaaatgaatccgatcgaagc
aagccgattcgattactagtgctatgtcagacacatgcaggttatttgttattgtcccgc
ctgctgtcacgtgcctaccgcgaaaaccaatttcaaaacagggccgagatcaaagaatcg
tggctacaacccgatgattggggcacggagggactcattgctttatcaggcgcgcgttta
ggtgacatcggattatcgctgttacaaaataatatattacaagccgagattcaggtacaa
aaatgggcgactctgtttcccgatcgtttctatcttgagatccagcgtgatggccatgcc
aatgaagcaatgctggttcaacattcgctcgcgctggccaagaaattcaatttgcccgtc
gtagcgacgcaagcggtgcaatttctcaatgtggaagattatcaggcgcatgaagcacgt
gtttgtattgctgaagggtacattctggaagataaacgccgtcaaaaaaattttacgcaa
cagcaatatttcaaaacccaaaccgaaatgacacagctgttcgccgatattcccgccgca
ttgacaaatacaattgaaattgccaagcgctgtaatctgatattggaattgggcgtgaac
cggcttccattatttcctacgcctaataacgaaagcctggatcaatacctgcgaagccag
gctgaattgggcttgattaaacgcatgacaagcttgtttcctgatgcagaaatgcgtaat
gacagaatcactcagtatcaatcccgtcttgagtttgaggtcaataccattatccagatg
gggtttgccggctattttctgattgtcgccgattttatcaactgggctaaacataacaat
gtaccggtaggccccggacgtggttccggagccggctcattggtagcttattcactggga
attaccgatcttgatccgttacgctatgacttgttgtttgaacgttttctgaatcccgaa
cgtatctcaatgcccgattttgacattgacttttgccaggaccggcgcgaactggttatt
gaatatgtcaagcaacgctatgggatcggaaaagtctctcaaatcgccacatttggcacc
atggctgccaaagccgtaattcgggatatcggtcgggttatggatttaccgtacaacttt
gtcgatcagctcgccaagttgataccgttcgagatcggcatgactttaaaaaaagcacgt
caactcgaaccacaactcaatcaacgagccgaagaagaagatgtccgcaacctcctggaa
ttagcggaaagcctcgagggcatcacacgcaatgtcggtatgcatgccggcggggtgctt
atcgcttcaagcgaaattaccgatttttgcccaatctactgcaccgaatccggtgattcc
gtcgtcagccagctggataaggatgatgttgaaaaaatcggtctggtgaaatttgatttt
cttggattacgcaccttgacaatcctggatcgtgcggtcgggtatatccgtcaattacat
ccaaatatcgactctcccgaatcccggcttttctcactggaaaccttaccattggatgat
gatgcaacttatgcattaatgcgtaaagggaatgctgtcggcatctttcaattcgagtcg
cgaggcatgatcgatctgctacagaaagcaaaaccggaccactttgaagatattatcgcg
ctggttgcattatatcgccccggcccgatggatctgattcctgaatttattgatcgcaaa
catggtagaaaacagattgaatatcttgatccacgcctggaaccgattctggggccgact
tatggcatcatgatttatcaggagcaagtcatgcagatcgcgcaagtcattggcggctac
agtcttggcagcgcggatttactacgccgcgcgatgggcaagaagaaggtcgaggaaatg
gcgcaacagcgtgacatttttgtctccggtgcaatcaataacggtttgagtgaagataaa
gctactgaattgttcggtttaatggaaaaatttgccggctatggcttcaataaatcacac
gccgcggcttatgcgctcattgcgttccaaacggcttacctgaaagcgcattatccggca
gaattcatggcggcttgtttgtccgccgatatggacgacacggataaagtacatattttc
gttgaagacagcattgccaatggaataataattctgccacccgatattaacctttccgat
taccgtttcattccggtggatagcaaaaacatccgtttcggtcttggcgcagtcaaaggt
accggagaatccgcagtcaattcgatcatcgcagtacgccggcaaactggaccattcact
gatttatttgatttctgcaatcgtgtcgaccggcggatcgccaatcgccgtgtgatggaa
tcgctaatccgtgtgggtgcgtttgatatcatcaatcccaaccgcgccagcttaatggct
tcagtcggcttagccatagaatccgccgaacagacaagtcaatcttccaatcaaattaat
ttatttggtgaaacgagcagcgatgcacagatgcagccacaattgattcaagcggaatca
tggcacgatcgagaaaaactgcatcaggaaaaaatcggcctaggctattattttagcggt
catccatttgacacctatgcttcagaactgaagcactttatttgtacccgacttgaccgg
ctaaatccgcaacgtgagccgcaactgctcgccggcatcattcactcgattcgcacacaa
atgacacggcgcgggaaaatgggagtcatcaatttggacgatggtaaggcacgaatagaa
gtggttatttttagtgagctcttcgatgcgaatcgtacttggttaaaagaggatcaactt
ttaattgcagaagctaaaataagcatgcgcgcatacaacggagacgaagaagacggatta
agaattaccgctgagcggctgtataatctcgccgcaatccgctcgcgtttcgccaaacaa
atcaaaatttactgcaatctcctcactctcgatcaattatccggtcttaaaaaactgttg
ataccattttccactcaaacgcaaaaatctattgcagatttttgccccattacagtcgtc
tatcgcaatgaccgagccagcggtgaactggagttgggaaatgattggcgggtacatttg
catgaagatctgctgcagtcattaaatacacattttagaactgagaacgtggagatcgtt
tactcaaaaaataataaatcataa
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