Nitrosomonas sp. AL212: NAL212_1616
Help
Entry
NAL212_1616 CDS
T01443
Name
(GenBank) Hemolysin-type calcium-binding region
Organism
nit
Nitrosomonas sp. AL212
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HemolysinCabind
Motif
Other DBs
NCBI-ProteinID:
ADZ26494
LinkDB
All DBs
Position
complement(1563158..1568572)
Genome browser
AA seq
1804 aa
AA seq
DB search
MNDRQLQIVQTVVAMFNAAPGAHYLNEFVSFLGNTGSSVKELASILTQTDVFKQSLYSDT
LSHSEFAHQFVNNTVGLLVSNKDKRWAASEIEKMLEAGANRGDVLHQAATALASVDSNNI
HWGAAAQRFNHKIEAAAFYSIDQGGSATSLSVLQRVIEEITGDVADLAATKALLAGGATG
KVIDGYVKEAFVFADLNGNRLHDSGEKNVITDALGNFSIPGINGFGELIVTGGIDIATGR
PFEGVMTAPAGATLINPFTTLVSKLVQADNLSVEIANAKILSSLGLNGDINLLHFDPIKE
TVRTDLDETAANTALVIYVASTQIQTIIGQTAALLSGTGISPDETIAIDWAYDALAAILN
TATEEFSLTSNHNIGQVIRNAAFLSDADDSILIKAALLLDDATQTTANLSQKIINTSQSN
VSKLKILSNMAALQIVAEDIEIAMQSGAAQGNIKGTVINTTGTRLTSAIAAAGTKIGDVN
GDGKSDARSPPSSSASSAKTQYLATNATAFSGTAANDILSISTASTWTPLVMTAVILDGG
GGTNTLSVQDGSSIALAVVINFPNLFFDATGAIGTTNVTMSAAQNQSFTGTITAPSTGGS
GEEITIVGDGTVTTLANIENYTIEDDATDARTVAVIHAATHIAAASSSDAITFSFGALTY
TGTISGDTTVDDIISLDNGADISGGTITNVAALTLASGVSVRLSAAQNQSFTGTITAPGT
GSSGENILISGNGNITVLPNIESYELGDDTTNARTLTLGSGALTLIATNADDTITVNAAA
LAQNVALTLGSSASSMIISNLLGDIVASNLTGTLIITTANATDNNISITTGSSATSVNVA
AGAASDNISIDATALTNNTSLTITSSAAAAGSVSIVGLVGNLTVSNPTSGIISVAVTDNT
IDDEITVVAGASNLIVSNVANGDTVTITGFTGSTLTGTIAGTTGKFNITAGTATNNMITG
TGDDSFTFAAGSGLTSADSVNGGEGTDTVALTGNTAVAATNFDNVSNIEAITVANTTGAV
AITTKDTLVAAGAVLALQASSLTTGILTFNGAAETDGTFTITGGGGNDSITAGLGDDTLS
GGAGNDTLRFAAVSGLTHADIVDGGTGTDTVALTGNTDFTASTDFDNVRNIEVITLGNTS
TAVTITTQDALVAVGATLTLTNAANSGVLTFNGSAETDGAFTITGGTGNDLITAGSGNNT
LSGGNGDDSFIFAAGTGLTTDTVNGGTGTDTVTLTGTTVVTATQFNNVSNIEVIALPDMV
NTAVTITTVNALVASGATLTLSNAANSGILAFNGAAETNGLFNIIGGTGNDNIIGGSGND
VLTGGDGSDSITAGLGNDALSGGTGDDSFTFAAGSGLTSADSVNGGEGTDTVALTGNTAV
AATNFDNVSNIEAITVANTTGAVAITTKDTLVAAGAVLALQASSLTTGILTFNGAAETDG
TFTITGGGGNDSITAGLGDDTLSGGAGNDTLRFAAVSGLTHADIVDGGTGTDTVALTGNT
DFTASTDFDNVRNIEVITLGNTSTAVTITTQDALVAAGATLTLTNVANSGVLTFNGSAET
DGAFTITGGTGSDNITGGAQNDTLAGGAGNDTLSGGTGNDSITSGAGTDSITGSAGADTI
SLGSSVSDNIRQTTIYSSVSDGAAGGANSGADTIIQFDANANTATDDLIRITDTFKSSLD
DDNDNTLDYSVSNGTDADNQAISGGANREATILLDAELEVVLADFTTSGLANLIAELGEE
IDFTTIATGEESLFLMNFSTTQTALALYTAGSGGDDVIDAADIQILGIVTHNDGTGLAAN
NLTF
NT seq
5415 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggcaactgcaaatcgtgcaaacagttgtggcaatgttcaatgcagcgccc
ggtgcacactatttaaacgaatttgtttcgtttctgggcaacactggcagttcggtaaaa
gaactggccagtatccttacacagaccgatgtatttaaacaatcactctattccgataca
ttatcccattccgaatttgcgcatcaatttgtaaataataccgttggcctactggttagc
aataaggataagcgatgggccgcatcagaaatagagaaaatgctggaagcaggcgcaaac
cgaggggatgttctgcaccaggcagcgacggcacttgcttcagttgattccaacaacatc
cattggggcgcagcggctcaacgatttaatcataaaattgaggccgccgctttctactcg
attgatcaaggtggatcagccacaagcttgtcagttttacagcgagtaatcgaagaaatt
accggcgacgttgccgacttggccgcaactaaagcactgttagccggcggagctacaggc
aaagtcattgatggttatgtcaaagaagcgttcgtttttgcagatcttaatggcaatcgg
ttgcatgattccggagaaaaaaacgtaataaccgatgcactgggaaatttttccataccc
gggattaatggttttggtgagctaatcgtaaccgggggaatcgatattgccacaggcagg
ccttttgaaggggtcatgactgcaccagccggcgcaaccctcatcaatccattcactacg
ctggttagcaagttagtacaagctgataatctttctgttgagattgcgaatgccaagata
ctttcgtctttaggcttaaatggagatatcaatttacttcattttgatcctatcaaagaa
acagtccgcacggatctcgatgaaacggcagctaatactgcacttgtcatttatgtcgcg
tcgactcaaatccaaacaataattggtcaaaccgccgcattattgagcggtaccggcatt
tcacccgatgagacaatcgcaattgattgggcatatgacgcactggctgcaatactcaat
actgctacagaagaattttctctgacatccaatcataacatcggccaagtcattcgaaac
gccgctttcttatctgatgcagacgattccatattgatcaaagccgccctattgttagat
gatgccacacaaaccactgcgaatttaagccaaaaaattattaatacatcccaaagcaat
gtcagtaaattaaaaatactatcgaatatggcggcattacaaattgttgccgaagacatt
gaaattgcgatgcaatcaggtgctgcacaaggaaacatcaaaggtacggtaatcaacacg
acaggaacacggcttactagcgccatcgcagcagcgggcacaaaaataggtgatgtaaac
ggcgacggaaaatctgatgcacgatcgccgccctcttcttccgcatcatctgctaagact
cagtatctggcgaccaatgcgactgcattctcaggtactgctgcaaacgatattttgtca
atttccacagcatcaacctggacgcctctcgtaatgaccgccgttatattggatggcggc
ggcggcactaacacgttaagcgtacaagacggttccagtattgcacttgcggtagtgatt
aattttcccaatctattttttgatgctaccggcgctataggaactaccaatgtaaccatg
tcagccgcgcaaaaccagagcttcaccggcaccatcaccgctccgagcaccggcggcagc
ggcgaagaaatcaccattgtcggcgatggcacggtaaccacactggccaatatcgaaaat
tatacgatcgaagatgacgcaaccgatgcgcgcaccgtggcagtcatccatgcagcaacc
catatagcagccgcttcctcctccgatgcaatcactttcagtttcggcgcactgacttat
accggcaccattagcggcgatacgaccgtggacgatatcatcagtttggacaatggcgcc
gatatcagcggcggcaccatcactaacgtggcagcactgacgctggcttccggcgtatcg
gtgcgactttctgccgcgcaaaaccagagcttcaccggcaccatcaccgctccgggtacc
ggcagtagcggtgaaaatatcctcatttcaggaaacggtaacataacagtactgcccaac
atcgaatcctacgaattgggagacgataccaccaatgctcgtactcttacccttggttcc
ggagcgctcacactcatcgctactaatgcagacgataccatcacagtcaatgccgcagct
ttagcacaaaacgttgcattaactcttggatcaagcgcttcttccatgattatcagtaac
ttattaggagatattgttgcctccaatctcaccggcactctaataatcaccaccgctaat
gcaacggacaataacattagcatcaccacgggatcatcagctacatcggtaaatgttgct
gcgggagctgcatcagacaatatcagtattgatgcaacagcattaaccaacaatacaagt
ttaaccatcacttccagcgctgctgcggcaggatcagtcagcatagtaggcttggtcgga
aatctcacggtttcaaatccgaccagtggaataattagcgttgctgtgacagataataca
atagatgacgaaattactgttgtcgcgggtgcatcgaatcttatagtcagcaatgttgca
aacggcgataccgtgacaattacaggatttacgggatcaacattgaccggaacgatcgcc
ggaaccacaggaaaattcaatattaccgctggaactgcgaccaataatatgattaccggt
actggcgacgacagttttacctttgccgcaggcagcggactaaccagtgcggattccgtc
aacggaggggaaggaaccgataccgttgcgctgacgggcaacacagcggtcgctgccacc
aactttgacaacgtcagcaatattgaagccattacagtggcaaacactaccggagcagtc
gcgattacgaccaaagatacgctggttgctgcaggggccgtcttggcgcttcaggcgagt
tcactgacaaccggaatactgacattcaacggtgctgcagaaaccgatggcacgttcact
attacaggtggtggtggcaatgacagcataacagccggattgggcgatgacaccctgtcg
ggaggtgcaggtaatgatacgctccgattcgccgcagtctccggcttaacccatgcggat
atcgtggatggcggcaccggaacggataccgtcgcgctgacgggaaatacggattttacc
gcatccacagatttcgataatgtccggaatattgaagtcattaccctaggcaacaccagt
acggcggttaccatcactacgcaagatgccctggttgccgtcggtgcaaccttgacactg
acaaatgccgccaattcaggtgtactgacattcaatggcagtgcagaaacggatggcgcc
tttaccatcacgggcggaaccgggaacgatcttattaccgcgggctcgggaaataatacc
ctctcagggggcaatggagacgatagtttcattttcgcagctggaacaggattaacaaca
gatactgtcaatggcggaactggaactgatactgttacgctgacaggaactaccgtcgtg
actgcaactcagttcaataatgtcagtaatatcgaagtcatcgcactgcccgacatggtc
aacacggctgtcaccattaccaccgtcaatgctctggttgcatcaggcgccacgctcaca
ttatcaaatgcagcaaattccggaattctggcattcaacggtgctgcagaaaccaatggt
ctattcaacatcatcggtggcaccggcaatgacaacattatcgggggctcaggtaatgac
gtactgacaggcggcgatggcagcgatagtattactgccggattgggtaatgatgcatta
tcgggaggaactggcgacgacagttttacctttgccgcaggcagcggactaaccagtgcg
gattccgtcaacggaggggaaggaaccgataccgttgcgctgacgggcaacacagcggtc
gctgccaccaactttgacaacgtcagcaatattgaagccattacagtggcaaacactacc
ggagcagtcgcgattacgaccaaagatacgctggttgctgcaggggccgtcttggcgctt
caggcgagttcactgacaaccggaatactgacattcaacggtgctgcagaaaccgatggc
acgttcactattacaggtggtggtggcaatgacagcataacagccggattgggcgatgac
accctgtcgggaggtgcaggtaatgatacgctccgattcgccgcagtctccggcttaacc
catgcggatatcgtggatggcggcaccggaacggataccgtcgcgctgacgggaaatacg
gattttaccgcatccacagatttcgataatgtccggaatattgaagtcattaccctaggc
aacaccagtacggcggttaccatcactacgcaagatgccctggttgccgccggtgcaacc
ttgacactgacaaatgtcgccaattcaggtgtactgacattcaatggcagtgcagaaacg
gatggcgcctttaccatcacgggcggaactggaagtgacaacatcaccggtggagcccag
aatgatacgcttgccggaggagccggcaacgatacactcagcggcggcacgggcaatgac
agcatcaccagcggcgccggaaccgatagcatcaccggtagcgcaggcgcggatacgata
tccttgggcagcagcgtcagtgataatatccggcaaaccaccatttacagttcagtttcg
gatggtgcggcaggaggtgcgaacagtggcgccgacaccatcattcagtttgacgccaac
gccaatactgctacggacgatttgatccgaattacagacacttttaaatcatcgctggat
gatgataatgataacactctggattattcagtaagcaatggtacggatgccgacaatcag
gccatcagtggtggtgccaatcgagaagcaacgatattgctcgatgccgaattagaagtt
gtattggcggatttcaccacatccggattggccaacctgattgctgaattgggtgaagaa
attgactttaccacgattgcgaccggggaagaatccttattccttatgaatttctccacc
acacaaactgcactggcgctctataccgccggatcagggggagatgatgtaattgacgca
gcggatattcagattctaggcatcgttacgcataatgatggcacgggactcgcagcaaat
aatcttacgttctag
DBGET
integrated database retrieval system
