Nitrosomonas sp. AL212: NAL212_1689
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Entry
NAL212_1689 CDS
T01443
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAL212_1689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nit03021
]
NAL212_1689
03019 Messenger RNA biogenesis [BR:
nit03019
]
NAL212_1689
Transcription machinery [BR:
nit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NAL212_1689
Messenger RNA biogenesis [BR:
nit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NAL212_1689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
NACHT
OB_RNB
S1CSD-TOTE-2
Mor
nSTAND_NTPase7
AAA_22
AAA
nSTAND_NTPase5
Nodulin_C
Motif
Other DBs
NCBI-ProteinID:
ADZ26562
LinkDB
All DBs
Position
complement(1630006..1631265)
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AA seq
419 aa
AA seq
DB search
MRLSDLKNLHVTELVKMAIENEIDGANRMRKQDLIFALLKNQARKGENIYGHGTLEVLQD
GFGFLRSPDTSYLAGPDDIYISPSQIRRFNLHTGDSIDGEIRPPKDGERYFALVKVDKVN
NEPPENSKQKILFENLTPLFPDERLILERDIKAEENITSRIIDLIAPIGKGQRGLLVASP
KSGKTVMLQHIAHAIAANHPDVILMVLLIDERPEEVTEMIRSVKGEVISSTFDESAARHV
QVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNAVVPASGKVLTGGVDASALQRPKRF
FGAARNIEEGGSLTIIATALIDTGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIYPAINV
NRSSTRREELLIAAEVLQKIWVLRKLLHPMDDMDAMAFLLDKIKGTKNNSDFFDSMRRV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttatctgatctaaaaaatttacatgtcactgaattagtaaaaatggctatcgaa
aacgaaattgacggtgccaaccgaatgcggaagcaggatttgatttttgctttgcttaag
aaccaggcacgcaagggtgagaatatttatggtcatgggacgctggaagtgctgcaggat
ggatttggttttttacgctctcctgacacttcctatttagctggtccggatgacatttat
atttcaccgagtcaaattcggcgctttaatttgcatacgggcgattcaatcgatggcgag
attcgtccacccaaagatggagagcgttattttgcactggtgaaagttgataaagttaat
aatgagccaccagaaaattccaagcagaaaattctgtttgaaaacctgacaccgttattc
cctgatgaacggctaatacttgaacgagatattaaagctgaagaaaatattacaagtcgt
attatcgatttgattgctccgattggcaaagggcagcgcggcttgctggtggccagccct
aaatcaggaaagacggttatgctgcaacatattgcacatgccattgcggctaatcatccg
gatgtgattctgatggtgttattgatcgatgaacgtccggaagaggttacggaaatgatt
cgctccgtcaagggagaggtgatttcttccaccttcgatgaatccgctgctaggcatgtt
caagtggccgaaatggtcattgaaaaagctaagcgtctggtcgagcacaagaaagatgtt
gtaatactgcttgattcgattacacggctggctcgagcttataatgccgtggtacctgca
tctggaaaggtgttgacagggggcgtggatgcaagtgcgctgcaacgacctaagcggttt
tttggtgcggcacggaatatcgaagagggcggatcgttgacaattattgcgactgccctg
attgataccggttcacgaatggatgatgtgatatatgaggaatttaaaggtaccggcaat
atggaaatccatcttgatcgccgtatggctgagaaacggatatatcctgcaattaacgtg
aatcgatcaagtacgcgccgtgaagaattgttgattgccgccgaagttctgcagaaaatc
tgggtgctgcgtaagttactacatccaatggatgatatggatgcaatggcatttttgtta
gataaaatcaaagggaccaaaaataattctgatttttttgattcaatgagacgagtatag
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