Nitrosomonas sp. AL212: NAL212_2520
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Entry
NAL212_2520 CDS
T01443
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NAL212_2520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nit03019
]
NAL212_2520
03110 Chaperones and folding catalysts [BR:
nit03110
]
NAL212_2520
03029 Mitochondrial biogenesis [BR:
nit03029
]
NAL212_2520
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nit04147
]
NAL212_2520
Enzymes [BR:
nit01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
NAL212_2520
Messenger RNA biogenesis [BR:
nit03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
NAL212_2520
Chaperones and folding catalysts [BR:
nit03110
]
Heat shock proteins
HSP60 / Chaperonin
NAL212_2520
Mitochondrial biogenesis [BR:
nit03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
NAL212_2520
Exosome [BR:
nit04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
NAL212_2520
Exosomal proteins of other body fluids (saliva and urine)
NAL212_2520
Exosomal proteins of breast cancer cells
NAL212_2520
Exosomal proteins of colorectal cancer cells
NAL212_2520
Exosomal proteins of bladder cancer cells
NAL212_2520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADZ27325
UniProt:
F9ZHH9
LinkDB
All DBs
Position
complement(2488266..2489915)
Genome browser
AA seq
549 aa
AA seq
DB search
MSAKEVKFGDSARHRMVAGVNILADAVKVTLGPKGRNVVLDRSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMLKEVASKTSDVAGDGTTTATVLAQAIVKEGMKYVAAGMNPMDLKRGI
DKAVTTAVGELKKLSKPCATAKEIAQVGSISANSDNEIGKIIADAMDKVGKEGVITVEDG
SGLQNELEVVEGMQFDRGYLSPYFVSSAEKQIALLDNPYILLHDKKISNIRDLLPILEQV
AKAGKPLLIIAEDVDGEALATLVVNNIRGILKTCAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEVGLTLEKATLNDLGQAKRIEVGKENTTIIDGAGNADNIEGRVKQIRAQIEEATSDY
DKEKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGVIPGGGVALL
RAISAVKSTKGDNHDQDAGIKIVLRALEEPLRQIVTNCGDEPSVVVNKVAEGQGNFGYNA
ATSEYGDLVAMGVLDPTKVTRSALQNAASVASLMLTTDAMVAELPKEDAPAGGGMGGMGG
MGGMGGMDM
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaagaagtgaagtttggtgattcagcgcgccatagaatggtagccggtgta
aatattttagccgatgcggtaaaagtgacattaggacctaagggacggaatgttgtcctg
gatcgttcctatggtgcgcccactatcactaaggatggtgtatctgtcgccaaagaaatt
gaattgaaagataaatttgaaaatatgggcgcgcagatgttaaaagaagtggctagcaaa
acatctgatgtggccggcgatgggacaaccactgcaaccgtgttggcgcaagcgatcgta
aaagaaggtatgaaatatgtagcggctggtatgaatccgatggatctcaagcgcggaatt
gataaagcagtaaccacagcggtcggcgaattaaagaaattgtcaaaaccatgtgcgacc
gcaaaggaaatagctcaagttggaagtatttctgcaaattctgataatgaaattggcaag
atcattgcggatgcaatggataaagtgggtaaggaaggtgtaattacagttgaagatgga
tcaggattgcagaatgaattagaagttgttgaaggtatgcagtttgatcgtggttatctg
tcgccttattttgtaagtagcgcggaaaaacagattgcgctgctagataatccatatatt
ttgctgcatgataagaaaatttctaatattcgtgatttattaccgatattggaacaagtt
gcgaaagcgggtaagccgttactgattatcgctgaagatgttgatggtgaagcacttgct
acattggttgtgaacaatatacggggtattctcaaaacttgtgcggttaaagcgcctggt
tttggtgatcgccgtaaagcgatgcttgaggacattgcaattttaactggtggcacagtt
attgctgaagaagttggtttgacgctggagaaagctacattaaatgatctcggtcaagcc
aagcgtattgaagtagggaaagagaatactacaattatcgatggcgcaggcaatgccgat
aatattgaaggccgtgtcaaacagatccgtgcacaaattgaagaagctacaagtgattac
gacaaagaaaaactgcaggaacgtgttgctaagctggccggtggtgtggcgctaattaaa
gtgggtgctgctacagaagttgaaatgaaagagaaaaaagctcgggttgaagatgcatta
catgcaacacgtgctgccgtggaagaaggtgttattccaggtggcggtgtggctttattg
cgtgccatttcagccgtcaaaagcaccaaaggtgataatcatgatcaagacgccggcatt
aagattgttttgcgtgcactggaagagcctctacgtcaaattgtaacgaattgtggtgat
gagccgtccgttgtggttaataaggtggctgaaggccaaggaaattttggctacaatgct
gcaacgagcgaatatggtgacttggtagcaatgggggttctcgatccaaccaaagtgact
cgctctgctctacagaatgcagcttcggttgcaagtttgatgctaactactgacgcaatg
gttgccgaattgcctaaagaagatgcaccagccggtggtggcatgggtggcatgggtggc
atgggtggtatgggtggcatggatatgtaa
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