Nitrosomonas sp. AL212: NAL212_3117
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Entry
NAL212_3117 CDS
T01443
Name
(GenBank) RNA polymerase recycling-like protein
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
nit
Nitrosomonas sp. AL212
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nit03021
]
NAL212_3117
Transcription machinery [BR:
nit03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NAL212_3117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
Flavi_DEAD
Helicase_C_2
AAA_34
DA_C
Motif
Other DBs
NCBI-ProteinID:
ADZ27879
UniProt:
F9ZJB2
LinkDB
All DBs
Position
complement(3097886..3100786)
Genome browser
AA seq
966 aa
AA seq
DB search
MQDFKPGQRWICDVDLQLGLGTVQTVEHRIVTLIFKATGEIRSYARQSAPLTRVVFKSGD
TVGSYDNAVLKVTEVHERNGLVVYSCVNESGSSIELAEAQLAHHLLLNRPAERLFTGQFD
QDKWFRIRYQTLLIRNRLAQAPLYGLVGTRTSLIPHQLYIAHEVGRRYAPRVLLADEVGL
GKTIEAGLILHQQLLTERAKRVLIVVPETLIHQWLVEMLRRFNLQFSIFDEARCLALEES
EEGENPFHSEQLILCSLNFLRQYPKRFQTALQGNWDLLVVDEAHHLHWSQQAVSPGYAMI
EQLAACTKGVLLLTATPEQLGKASHYARLRLLDPHRFNSFSAFIAEEQSYEPIAQAVEAL
LEGQALNAEIRQLIADTLNAAQAQVLLACLQDPAADQSQILKTRNKLAELLLDRHGTGRI
LFRNTRAAIKGFPERKLVAVPLALPVEYQQCLITFETTALSQPRLLLCPELLYQARAEPE
QPYWTEIDPRISWLSTTLRQLKPEKVLVIAANTQTTRDIAQALKMQTGQHIPVFHESMSL
IERDRAAAFFADKETGSQILICSEIGSEGRNFQFSHHLVLFDLPLNPDLLEQRIGRLDRI
GQTETIQIHVPYLENSALAVMFHWYHEGLNAFEKTCPAGQTVFVKVEEQLIAALHQRQTQ
DKALAGLVGVTQTTHRELNEALDCGRDKLLEYNSFRPGVAEQLMQAARTQDNDPALLQYM
ETVFDCCGVHIEEHRAGSYLTEPSEHMSMPFPGLQDEGSVITYMRDVALANEDMHFLTWE
HPMVTHAIERILSNESGNAVVVALKHQQVQPGTLLLETLFVLEASGQHVQQSNRYLPPAV
IRIVLDEQGSGDYPHLDHDAINQHVQPVAPGIAKQVMQLKEGAIRELLRVSEQHAGAQAP
QLIAAAEARIRQTFIPEIERLKALQQVNPNVRDEEVQFFEQQLQQLTGALKSSNLGLDAV
RVIVAT
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttcaagccgggtcaacgttggatctgcgatgttgatttacaactgggactg
ggtacggttcagaccgttgaacacagaattgttacccttatttttaaagcaacgggtgaa
attcgttcttatgccagacaatctgcgccattgacgcgggtggtttttaagtccggggac
actgtcggcagttatgacaacgctgtattaaaagtcactgaagtgcatgaacgcaatggt
ttggtggtttattcctgtgtaaatgaaagtgggagcagcatagaacttgccgaagcgcag
ctagcgcatcacctgctattgaaccggccggcagaacgcttgttcacgggtcagtttgat
caggacaaatggttcaggattcgttatcaaacactgctgatccgcaaccgactggcgcaa
gcgccgctgtacggcttggtgggcacacgtaccagcctgatcccgcaccaactgtatatt
gctcatgaagtcggtcgtcgttatgcgccgcgcgttttgttggcagacgaagtgggtttg
ggaaaaaccatcgaggccggattgattttgcatcagcaattgctcaccgagcgtgccaag
cgcgtgctcatcgtggtgccggaaaccttgatccatcaatggctggtggaaatgctgcga
cgatttaatttgcaattcagtatttttgacgaagcgcgttgtttagcgctggaagaaagc
gaggaaggtgaaaatccgtttcatagcgaacaactgatcctgtgcagtctgaattttcta
cgccaatacccgaaacgttttcaaacggcgctccagggtaactgggatttactggtggtc
gacgaagcgcatcatttacattggtcgcagcaagccgtcagtcctggatatgccatgatc
gaacaattggcagcctgcaccaagggtgtgttgctattgaccgctactccggagcaactg
ggcaaagccagccactacgcccgcttgcgcctgctcgatccgcatcgcttcaacagtttt
tccgcgtttatcgccgaagaacaatcgtatgagccgatcgctcaagctgtcgaagcattg
ctcgaagggcaagctttgaatgcagaaattcgccaactgatcgccgacacgctcaatgcc
gcacaagcgcaagtactgctggcgtgcctgcaagatcctgccgcagatcaatcgcagatc
ctgaaaaccagaaacaagctggcggaattattgctggaccgacatggtaccggccgcatc
ttgttccgcaatacgcgcgcggcgatcaagggatttcctgaacgcaagcttgtagctgtt
cctttggcgttacctgtcgagtatcagcaatgcttgataacttttgaaacgacagctctg
tcacaaccaagattgttattgtgtcctgaactgctctatcaggctagagctgagccggaa
caaccgtattggaccgaaatcgatccgcgtatcagctggttgagcacgacgctcaggcaa
ttaaaaccggaaaaagtgttggttattgcagccaatacgcaaaccacgcgcgatatcgcg
caggcactcaagatgcaaacggggcagcatattccggtatttcacgaaagcatgagtttg
attgaacgtgaccgcgcggccgctttttttgcagataaagaaaccggaagccagatattg
atctgctcggaaattggcagcgaaggccgcaatttccagttttcccatcatctggtgcta
ttcgatttgccgctcaatcccgatctgctggaacaacgcatcggccggttggatcgcatc
ggccagacggaaaccattcaaatccatgtgccctatctggaaaacagcgcgctggcagtg
atgttccattggtatcacgaggggttgaatgcatttgagaaaacctgcccggccggacaa
acggtgtttgtcaaagtcgaagagcaactcatcgctgcgctgcatcaacgtcaaacccag
gacaaagcactggccggattggtcggtgtcacgcaaacgacgcaccgggaattgaacgaa
gcgctcgattgtgggcgtgacaagttattggaatacaactcgttccggcccggtgtggcg
gagcagctcatgcaagctgcgcgcacgcaagataatgatcccgcgctgctgcaatacatg
gaaacggtgttcgattgctgcggcgtgcatatcgaagagcaccgcgccggcagctatctg
accgagccgagcgaacacatgagcatgccgtttcccggtttgcaggatgaaggctcggtc
attacctacatgcgcgacgtggcgctggccaatgaggatatgcacttcctgacatgggaa
catccgatggttacgcatgccattgagcgcatcctgagtaacgaaagcggtaatgctgtg
gtcgtggcgctgaaacaccaacaggtgcagccgggcactttgctgctggaaaccctgttc
gtgctcgaagccagcggacagcacgtgcagcaaagtaatcgttacctgccgcccgcggtg
attcgcattgtgctcgacgaacaaggcagcggcgactatccgcatctcgatcacgatgcg
atcaatcagcatgtgcagccggtcgcacccggtatcgccaaacaagtgatgcaactgaaa
gaaggtgcgatccgtgaattactgcgcgtgagtgagcagcacgccggcgcgcaagccccg
caactcatcgccgccgccgaagcgcgcatccggcaaaccttcatcccggaaattgaacgc
ctcaaagcgctgcaacaagtcaacccgaacgtgcgcgatgaagaagttcaattttttgaa
caacaactgcagcaactgaccggcgcgctgaaatccagtaatctggggctcgatgccgtg
cgggtgattgtggcgacgtaa
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