Candidatus Nitrosotenuis sp. DW1: DSQ19_01655
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Entry
DSQ19_01655 CDS
T07741
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Pathway
niu03420
Nucleotide excision repair
niu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSQ19_01655
03430 Mismatch repair
DSQ19_01655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niu03400
]
DSQ19_01655
Enzymes [BR:
niu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSQ19_01655
DNA repair and recombination proteins [BR:
niu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSQ19_01655
MMR (mismatch excision repair)
Other MMR factors
DSQ19_01655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
DUF2800
AAA_12
AAA_30
AAA_11
Cas_Cas4
DEAD
ResIII
Ribosomal_S17
Motif
Other DBs
NCBI-ProteinID:
QLH08357
UniProt:
A0A7D5M9M3
LinkDB
All DBs
Position
complement(289202..292279)
Genome browser
AA seq
1025 aa
AA seq
DB search
MNITLNPEQQQAVTHLGSPLLVIAGPGSGKTRVIIERVMHLIKSGIKPSEILCLTFSEKA
AEEMKQRLEKLTDVTEMEISTFHSFAKEILEDNVLDSGIGMSSGVIKRSSQLVWGLKHID
DFKLEYLEIGNNSVEIIESIIDGISTFKDELISPEEIQKYIRIKLEKDISDEERNFLLKL
SDLCKVYFKYQEFQRSKAVIDFDDMVIQTIELFKKKSSVLSKYQKKFKHVLVDEFQDNNF
AQLELVKLITKDGNVTVVGDDDQSIYRFQGAYLTNFKDFQSHFPKTTVIVLNRNYRSPQN
IVSLASQLLEGLPERQQKKLKSEYEEGDKVTVAQCANESAEVEFVVKTIKELLGKKIKRR
DGTDSPLTYKDFVILSRRKSEGKKFAKSLKAHGLPTNFIGESNIFSSPVIRDMMAFLRIA
NKPTAAGIEIVRLMKNHGISEMNIARINHAAMKRARNDPTDIDFVFETLKNCNSLDVTQK
DEIREIAQQIQRIIELESKSTISEMVYQIMVSVSDLYKRLIQSDTPENRRNQLILKEFYN
ISIEYESLNPQGELDDFIKYLSLMGQFDIELKEGVGGDDSISVTTIHQSKGQEFPAVFIV
DVATNKLPLRYQAKKFYVPNDLSKGVIRTEDEKELYVQEERRLLYVAMTRAQNLLYITYA
KRYGQNIRETKPSKFLEDLKFDKNPLINVVEYQGQSGEALLEEEKKIERIKQDLQTKAVR
SLNQMHLKSAIQRIIELAKVKYFEENGTIQNFKPEDILKIDNSDTSLDDEIQGKRTPVIN
KDELRLSASKIKTYLDCPLKFKFAHILQVPTPPKPYFDLGSAVHAVAEHLTKLQLEGIPP
TEELAFKILAREWNSGGFQNDTQENQSKEKAKEMIRTYLKWTKENPNSPVAVEQRFTVEI
GGVPFNGFIDRVEKTPDGKFEVIDFKTGGVYENSKSVREDPQMNIYALGVEKLYGKQPQK
TSLFYLKHDKIVENPIEEQQVEKVRQAIDEKVKLILNEEFEATPSYQTCRLCDFWSICDQ
KEVDE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgaacataacattaaaccccgaacagcagcaggctgttactcatttgggaagcccgcta
cttgtaattgccggtccgggaagcggaaagaccagagtaattattgagcgggtaatgcat
cttataaaatcaggaataaaaccttccgaaattctatgccttacattttctgaaaaagcc
gcagaagagatgaaacagagactcgaaaaactcacagatgtcacggagatggaaatcagc
acgtttcattcttttgcaaaagagattcttgaggacaatgttcttgattcaggcatcggg
atgtcatctggcgtaatcaagagatcatcccagttggtatggggtcttaagcacattgac
gatttcaaattagagtatctggaaatcgggaataattctgtagaaatcattgaatccata
atagatgggattagcacgttcaaagacgagctgatatctcctgaagagattcaaaaatac
ataaggataaaactggaaaaagacatctcagatgaggagagaaattttcttctcaaatta
tctgatttatgcaaagtttatttcaaataccaagaatttcagcgaagcaaagcagtaatt
gattttgacgacatggtaatacagacaattgagcttttcaaaaagaagtcaagcgttctc
tcaaagtatcaaaaaaagttcaagcatgttcttgtggatgaattccaggacaacaacttt
gcacagcttgaacttgtcaagttaattacaaaggacggcaatgtcacagttgtcggagac
gacgaccagagcatatacaggttccagggggcatacctgacaaactttaaggatttccag
tctcatttcccaaagactacagttattgttttgaatcgcaattaccgcagcccgcagaac
atagtaagccttgcaagccaactgctggaaggcctgcccgaaagacaacaaaaaaaactc
aaatcagaatacgaggaaggcgacaaggtcaccgttgcccagtgtgcaaacgagtcagcc
gaagtcgagtttgttgtcaagacgataaaggagcttcttggtaagaagatcaaacgaaga
gacggaacagacagtcctcttacctacaaggattttgtcatactatcgcgaagaaagtca
gaggggaaaaagtttgccaagtcattaaaggcgcatggacttccaactaatttcattggg
gaatctaacatcttttcatccccggtcataagggatatgatggcgtttttgcgaattgca
aacaagccaactgctgcaggaatcgagattgtccgcctgatgaaaaaccatggaatttcc
gagatgaacatagctaggatcaaccatgctgcgatgaagagggcaagaaacgatcctaca
gacatcgactttgtttttgaaacactgaaaaattgtaacagtcttgatgttacacaaaaa
gacgagataagggagattgcacagcagattcagagaataatcgagcttgaaagcaagtcc
acgatcagcgagatggtgtaccagataatggtgtcagtctctgatctttacaagcgactc
atacagtcagacacgccggaaaacagaaggaatcaactgatactaaaagagttttacaac
atatcaatagaatacgagtctctaaatccccagggggagcttgatgatttcataaagtat
ctttctttgatgggccaattcgacatcgagctaaaagaaggtgttggtggggacgattcc
atatctgtcaccaccatacatcagagcaagggccaagagtttccggcggttttcattgtc
gatgttgcaactaacaaacttccgctaagataccaggcaaaaaaattctatgttccaaat
gatctatccaaaggagtcatcaggacagaggatgaaaaggagctctatgtacaagaagag
agaagattgctttatgttgcaatgacaagagcgcaaaacctgctttacataacctacgca
aaacggtacggtcagaacatcagagaaacaaagccttcaaagttcctagaggacttaaaa
tttgacaaaaatccactcatcaatgtcgtagaatatcaaggccaaagtggagaagcttta
cttgaagaagaaaagaaaatcgagagaataaagcaggaccttcagacaaaagcagtgagg
tcgctcaaccagatgcacctcaagagcgctattcaaagaataatcgagcttgccaaggta
aagtactttgaggagaacgggacaattcagaatttcaagccagaagacattctgaaaata
gacaacagtgatacaagtcttgatgatgagattcaaggaaagagaacccccgtaattaac
aaagacgagctaagactgagtgcatcgaaaatcaagacataccttgactgcccactgaaa
ttcaaatttgcgcacatattgcaggtgcccactcctcccaaaccatactttgatctagga
agtgcagtgcatgcagtagcagagcatctgacaaaactccagctcgaagggatacctcca
acagaggaactcgcatttaagatattagcaagagagtggaactcaggcggattccagaac
gatactcaggagaaccagtcaaaggaaaaagcaaaggagatgatcagaacatacctcaag
tggacaaaagaaaatccaaattcgccagtagcagtagagcagagattcaccgtggaaata
ggtggcgttccgtttaacggttttattgacagggtggaaaaaactccagacggcaagttc
gaggtcattgattttaagacaggcggagtctatgaaaacagcaaatcagtcagggaagat
ccacagatgaacatctatgccttgggtgtggaaaaattatacggcaagcagccacaaaag
acttcgctgttttatctaaaacatgacaaaattgtagagaatccgatcgaagagcaacaa
gttgagaaggtcaggcaggccattgatgaaaaagtcaaattgattctaaatgaagagttt
gaggcaacacctagctatcagacttgcaggctgtgcgacttttggagcatttgtgatcag
aaggaagttgacgaataa
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