Candidatus Nitrosotenuis sp. DW1: DSQ19_01900
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Entry
DSQ19_01900 CDS
T07741
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K13798
DNA-directed RNA polymerase subunit B [EC:
2.7.7.6
]
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Pathway
niu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSQ19_01900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niu03021
]
DSQ19_01900
Enzymes [BR:
niu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSQ19_01900
Transcription machinery [BR:
niu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DSQ19_01900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
FYVE_2
DUF7245
FtrD-like
MRNIP
Motif
Other DBs
NCBI-ProteinID:
QLH08401
UniProt:
A0A7D5M821
LinkDB
All DBs
Position
337413..340760
Genome browser
AA seq
1115 aa
AA seq
DB search
MSDTSNKRWPIIQDLLKREGIARQHLNSFDEFLERGLQSIIDEVAQIEIENAEYPYKIQL
GKVKLQQPRMMELDGSITHITPAEARLRNVSYSAPIMMEASVVEDGKILESRFVHIGDIP
VMVRSNACILHNFSTQKLIEHGEDPNDPGGYFIINGSERVIVGLEDLSYNKIIVDKEKVG
GNDVFKAKVYSSIVGYRAKLELVMKNDGLIVARIPGSPVDIPVVTLMRALGLEADREVAA
AVSLVDSLQNELEASFEKAADVQTTKDAIVYISKRIAPGMLEEFQIKRAETLLDWGLLPH
LGKHQENRREKAQFLGEAACKLIELKLDWISPDDKDHYGNKVIKFAGQMLADLFRTAFRN
LVRDMKYQLERSGQKRGINAVAAAIRPGIVSDKLNNAIATGNWGRGRVGVTQLLDRTNYL
STISHLRRIQSPLSRTQPNFEARDLHPTHFGRICPSETPEGSNCGLVKNLALSAIISVNV
SPEEIIEKLYDLGSVHFTDAKEDLKRDGTRVFVDGRLVGYYKDGEKLVESLRELRRSSKI
HPHVGISFHKSSVEGATKRLYVNCNAGRVLRPLIVIKDGKSLLTPELIDKVSKKLMSWND
LLRMGVIELNDANEEENCFLTLDDKDTKKYTHLEIFPSAILGAGASIIPYPEHNQSPRNT
YESAMAKQSLGFSTPMMNTSTYVRQHFMWYPQTPIVTTKAMNLLGLEDRPAGQNCVVAVL
PFDGYNIEDAIVISKAAVDRGLGRTFFFRIYEAEAKQYPGGMRDNFEIPNAEDNIRGYKG
EKAYRLLEEDGVIATESPATGGDILIGKTSPPRFMEEYREFESKGPYRRDTSIGVRPSET
GVVDTVVMTQSNEGGKMYKIRVRDMRIPEIGDKFASRHGQKGVIGILARYEDLPYTAEGV
IPDVLINPHAFPSRMTVGMFMESISGKAAAQRGTKFDGSAFVGEKMDEIKTALEGSGLKY
SGKEVMYDGRTGKAFPVEVFMGVVYYQKLHHMVADKIHARARGQVQMLTKQPTEGRARGG
GLRFGEMERDCLIAYGASMILKDRLLDESDKAEIYVCERCGLVAYHDVKQRKYVCRVCGD
KAKVSSVSVAYAFKLLLQEMQSLNVAPRLMIKERV
NT seq
3348 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacttcaaacaaacgctggccaattattcaggatcttctaaagcgagaggga
attgcaagacagcacctcaactcttttgacgagttccttgaacgtggactacaaagcata
attgacgaggtagcacaaatcgaaattgaaaatgcggaatatccatataaaattcagctt
ggcaaagtaaaattacagcaaccgcgaatgatggagcttgacggatcaatcactcatatc
actcctgcagaagcgcgactcagaaatgtttcatactctgcaccaatcatgatggaggca
agtgtagttgaggatggaaaaattctagaatcaagatttgtccacatcggcgacatccca
gtgatggtaagatcaaacgcatgcatactgcacaacttttcaactcaaaagttaatcgaa
cacggcgaggatccaaacgatcctggaggatatttcataattaacggatcagagagagtg
attgtcgggctagaggacttgtcttacaacaaaatcattgtcgacaaggaaaaagttggc
ggcaacgacgtattcaaagccaaggtatattcatcaattgtaggttatcgcgcaaaacta
gaactcgttatgaaaaacgatggactgattgttgcaagaattcctggctctcctgttgac
attccagttgtgacactgatgcgagcactaggtcttgaagcagaccgtgaagttgcggcg
gcagtatcgcttgtggacagccttcaaaacgaactagaggcgtcatttgaaaaggcagca
gacgtacaaacaacaaaagacgcaattgtatacatcagtaaaagaatcgcgcctggaatg
ctagaagagttccagataaagagagcagagacactgcttgattggggtctcttgccacac
ctaggaaagcaccaagaaaataggagagaaaaggcacaattcctcggagaggcagcatgt
aaattaattgaattaaaacttgactggatatctcctgacgacaaggatcactatggaaac
aaagtgatcaagtttgcaggccagatgttagctgatctgtttagaaccgcatttagaaac
ttggttagagacatgaaataccaactggaaagatctggacaaaagcgaggcatcaacgcc
gtagcagcagccatccgtcctggaatagtgtctgacaaactaaacaatgcaatcgcaacc
ggaaactggggcagaggaagagtgggcgtaacacaactgcttgacagaacaaactatctt
tctactatttctcacctaagaagaattcaatcacctctgtccagaactcagccaaacttc
gaggcaagagacttgcacccaactcactttggcagaatctgtccaagtgaaacacccgaa
ggctctaactgtggtcttgtaaagaacttggcactatctgcaattatttcagtaaacgta
tcgccagaagaaatcatagaaaaactctatgacttgggctccgttcatttcactgacgca
aaagaggacctaaaacgagatggaaccagagtattcgtagacggaagattggttggctat
tacaaagacggagaaaaactagtagagtcacttcgtgagctaagacgaagctcaaagata
cacccacacgtaggaatctcattccataaatcaagtgttgagggcgcaacaaagagactt
tatgttaattgcaacgcaggccgtgtactgcgtccgctaattgtgatcaaagacggaaaa
tcccttctgacaccagagctaattgacaaagtatcaaagaagctgatgtcttggaacgac
cttcttagaatgggagtaattgaactaaacgacgcaaacgaggaggaaaactgcttcctt
acacttgatgacaaggacaccaaaaaatatacccaccttgagatattcccatctgcaatc
ttgggagcgggtgcatcaatcattccatatcctgaacacaaccagtcaccaagaaacaca
tacgagtctgcaatggcaaaacaaagtcttggattctcaactccaatgatgaacacaagc
acctatgtcagacaacacttcatgtggtatccacagacaccgattgttactacaaaagca
atgaacttacttggactagaagaccgaccggcaggacaaaactgcgttgtagctgtattg
ccatttgacggttataacattgaagacgcaattgtgattagcaaagcagcagtggacagg
ggacttggaagaacattcttctttagaatctacgaggcagaagcaaaacaataccctggc
ggaatgcgagataactttgaaattccaaatgcagaagataacatccgtggttacaaggga
gaaaaagcatatcgattactagaagaagacggcgtcatcgctacagaatctccagcaacc
ggcggagacatcttgattggaaaaacaagcccgccaagattcatggaagaataccgtgag
tttgaatcaaagggaccatacagacgtgatacctcaataggtgtaaggccgtcagagact
ggcgtggtggataccgttgttatgacccaatccaacgagggcggaaaaatgtacaagatt
agagtaagagacatgagaatcccagaaattggcgataaatttgcatcaagacacggacag
aaaggcgtcattggaattttggcaagatatgaggatttgccgtatactgcagaaggagta
attccagacgttttgattaacccacatgcattcccgtctcgtatgaccgttggaatgttc
atggagtcaatttcaggcaaggcagcagcacagcgaggaaccaaatttgatggctctgca
tttgtcggagaaaaaatggatgaaatcaaaactgcactggaaggcagcggtttgaaatat
tctggtaaagaagtaatgtatgacggaagaactggaaaagcattcccagttgaggtattc
atgggagtcgtatactatcaaaaacttcaccacatggttgcagacaaaattcacgcaaga
gcaagaggccaagtccaaatgctcacaaaacaaccaacggagggaagagcaagaggtgga
ggtctgagatttggtgaaatggaacgagactgccttattgcatatggtgcatccatgatt
ctaaaagacagattacttgatgaatcagacaaagcagaaatctatgtctgcgaaagatgt
ggactggtagcatatcatgatgttaaacaaagaaaatacgtctgccgagtctgtggagac
aaggcaaaggtttcttcagtttctgtggcatatgcgtttaagctattgctccaggaaatg
cagagcctcaacgtggcgccaagactaatgatcaaggagagagtgtaa
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