Candidatus Nitrosotenuis sp. DW1: DSQ19_01905
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Entry
DSQ19_01905 CDS
T07741
Name
(GenBank) DNA-directed RNA polymerase subunit A'/A''
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Pathway
niu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DSQ19_01905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niu03021
]
DSQ19_01905
Enzymes [BR:
niu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
DSQ19_01905
Transcription machinery [BR:
niu03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
DSQ19_01905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QLH08402
UniProt:
A0A7D5M7N7
LinkDB
All DBs
Position
340761..344549
Genome browser
AA seq
1262 aa
AA seq
DB search
MSVQTVKAIDGIRFSVWSPTEIRKYSVAEITAPETYDEDGMAVQGGLMDGRLGTLEPGQK
CLTCGNTAARCPGHFGHIELAEPVLHIAFIDNIHKLLLATCRSCSRLKLPQEDLDNYTQV
QKQKAAYTILSQKRIPDEILDKAKKAKECPHCGKPQYDMIFTKPTIFIEKTEIGEHRLLP
ITIRERFTQIRDEDLRLLGYDPNTARPEWFILQVLPVPPVTVRPSIILETGIRSEDDLTH
KMVDIIRVNQRLKESKDAGTPPLIVQDLVDLLQYHTTTYFDNEVSGIPQAHHRSGRPLKT
LTQRLKGKEGRFRGSLSGKRVDFSSRTVISPDPSLDLSEVGVPEAVAKKLTIPEIITEWN
IERMRELVINGPDIFPGVNYIVRPDGVKIRLDFVEDRSVIAQNLEVGYLVERHLSNGDIV
MFNRQPSLHQMSIMAHYVRVLPGKTFRLHPSVCPPYNADFDGDEMNLHVPQSEEARAEAI
LLMRVQDQIISPRYGGPIIGALRDFITGSYLMTKDDTVIPPQEFANYAMLGGYEGALPEP
AVKGKDGPMYSGKQLFSLFLPKDFNYILTSKWSKGTKGQAKDVVIKNGELISGVIDKASI
GAEEPESVLHRIVKDYGNAIGKQFLNSVLIIAKQFITHYGFSYGYADLELSDKVKNDIHA
GIQETYDTVYDLISQAKKGTLKLTRGLSADEALEAYIVNELSKARDKAGNTADQQLDQKN
AARIMATTGARGSSLNIGQMAGALGQQSIRGNRLNKGYSNRALPHFKENEDNPDAHGFVK
SNYRDGLSTIEFFFHAMGGREGLVDTAVRTQQSGYMQRRLINALEHIKLEYDGTVRDPHG
HIIQFLYGEDGVDVQKSDHGEAFNITRLIESETIVDTGKKAVKDEQEELLKKYTKTFNPR
LTKLVEEGITQSKLSRDGIEKVLKKSLDLYNKAKAEPGQAVGIVTAQSIGEPGTQMTLRT
FHFAGIRERNVTLGLPRLIELVDARKKPVTPTMDIYLEEKYKKSREKAIEVARNTLQTKV
SALLSTADTNYTNEITLELSPGALNQRGCTVEEVETALASNKKFKIETSGNTLTLNLAEE
GDAPTVIAIRNKVLNTIVKGVPDITRVTVAQKDDEWVIQTTGSNLPKVLEIDGIDKRNVR
TNNVFEIAATLGIEAARNAMINELSSTLEDQGLEVDARYIMLVSDMMCSRGYLQQIGRHG
IAGTKDSVLARAAFEITVPTIADAALTGEVENLKGVTENVIVGSNIPVGSGTVDLFMQVS
KN
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagttcaaacagtaaaagcaattgatggaatccgattctcagtctggtcaccaact
gaaatcagaaaatactctgttgcagaaataactgcacctgagacatacgatgaggacgga
atggcagtccaaggtggactgatggatggacgacttggaaccctagaaccaggacaaaaa
tgcctcacatgcggaaacactgcagcaagatgccctggacactttggccatatagaactg
gcagaacccgtactacatattgcgtttattgacaatattcacaaattactgctggcaaca
tgccgctcttgctcaagactaaagcttcctcaagaagaccttgacaattacacccaggtt
caaaagcaaaaggcagcatacaccattttgtcgcagaaaagaattccagatgaaattcta
gacaaggcaaaaaaagcaaaagagtgtcctcactgtggcaagccacaatacgatatgatt
ttcacaaaaccgacaattttcatcgaaaaaacggaaatcggagagcacagactacttcca
atcacaattagagaaagattcacgcaaattagagacgaagatctcagactgcttggatat
gatccaaacactgcaagaccagagtggttcatcctgcaagtcctgccagttccaccagta
accgtaagaccatcaattattcttgagacaggaatcagatcagaagacgaccttactcac
aaaatggtcgacatcatacgagttaaccaaagactaaaggaaagcaaggatgcgggaact
cctccacttattgttcaggacttggttgacctgctccagtatcacaccaccacatacttt
gacaacgaagtatctggtataccacaggctcatcaccgttcgggtagaccgctaaagaca
ctaacgcaaagactcaaaggaaaggagggaagattcagaggatcactttctggaaaaaga
gtcgacttttcaagtagaactgtaatttcaccagacccgagcttagacctatctgaggta
ggagtaccagaggctgtcgcaaaaaagcttacgattccagaaattattacagaatggaac
attgaaagaatgcgagaacttgtaattaacggacctgacatattcccaggagtcaattat
atcgtcagaccagacggtgtaaaaatcagacttgatttcgtagaggaccgctccgtcata
gctcaaaatctcgaagttgggtatcttgttgaaagacatctctcaaacggagacattgtc
atgtttaacaggcaaccgtcactccaccaaatgtcaatcatggctcattatgtacgcgtt
ttgccgggaaagacattcagacttcatccgtcagtatgtccgccatacaacgcagacttt
gatggggacgaaatgaacctacacgtaccgcaaagcgaggaagcaagagcagaagcaatc
ttgctcatgagagtacaagaccaaatcatatctccaagatacggaggtccaatcatcggc
gcattaagggactttatcaccggatcatacctgatgacaaaggacgacactgtcatccca
ccacaggaatttgcaaactatgcaatgcttggcgggtacgagggagcactaccagaacct
gcagtcaaaggaaaggacggcccaatgtattcaggaaaacaactcttctcattattctta
ccaaaggactttaactatattctgacatccaagtggtccaagggaacaaaaggacaggca
aaagacgttgtcattaaaaacggagaactaatcagcggagtaattgacaaggcatcaatt
ggcgctgaagaaccagaaagcgtactgcacagaatagtaaaagactatggcaatgcgatt
ggaaaacaattcctaaactctgttttgattatcgcaaaacaattcatcactcattatgga
ttcagctatggctatgcagatctcgaactatcagataaagtaaagaatgacattcatgca
ggcattcaggagacatacgacaccgtatacgatctaatttcccaggcaaagaaaggtaca
ctaaaactcacaagaggtctgtcagcagatgaagcactggaagcatacatcgtaaacgaa
ctatcaaaggcaagagacaaggcaggtaataccgctgaccaacaacttgatcaaaagaat
gcggcaagaatcatggcaacaactggtgcaagaggttcttcactaaacatcggtcagatg
gcaggcgcattgggacaacaatcaattcgtggtaataggctaaacaagggatacagcaat
cgtgcactgcctcactttaaggaaaatgaggacaatccagatgctcacggatttgtaaaa
tcaaactatagggacggcctatcaacaatagagttcttcttccacgcaatgggtggacga
gagggactcgtagacactgcagtcagaacacaacaaagtggttacatgcagcgaagactc
atcaacgcactagaacacatcaaactagaatacgacggaaccgtacgagacccacacgga
cacatcatccagttcttgtatggtgaggacggagttgacgtccaaaaaagcgaccacggt
gaggcatttaacattacaagactaatcgaatcagaaacaattgttgatactggtaaaaaa
gcagtaaaggacgaacaagaagaactactcaaaaaatacaccaagacattcaacccaaga
ctgacaaaactagtagaagaaggaatcactcaatcaaaattatcaagagatggaatagaa
aaagtcctcaaaaaatcacttgacctatacaacaaggcaaaggcagaacctggacaggca
gtcggtatagtcactgcccagtcaatcggtgagccgggaactcagatgacacttagaaca
ttccactttgcaggaatcagagaaagaaacgtaaccttgggtcttccaagattaattgaa
ctggtagatgcaagaaaaaagccagtaacaccaaccatggacatctaccttgaggaaaaa
tacaaaaaatcaagagagaaggcaatcgaggttgcacgaaacacattgcaaaccaaagta
tcggcattactatcaactgcagataccaattataccaatgaaattacacttgagctaagt
cctggtgcgctgaaccaaagaggttgcactgtggaagaagttgagacagcactggcatca
aacaagaaattcaaaattgaaacaagcgggaacaccctgacactaaatcttgcagaagaa
ggcgatgcaccaactgtgattgctattagaaacaaggtcttgaatacaatagtaaaagga
gttccagacatcactagagttacagttgcacaaaaggacgacgagtgggtcatccaaaca
acaggatctaacttgccaaaagtacttgaaattgatggaattgacaaaagaaatgttaga
acaaacaatgtctttgaaattgcagcaacacttggaatcgaggctgcaagaaacgcaatg
attaacgaattatcctccactctggaagaccaaggactggaagtcgatgcaaggtacatc
atgttggtatctgatatgatgtgctcacgtggatacttgcaacaaataggaagacacgga
attgcaggaaccaaagacagcgtcttggcaagagccgcattcgaaatcacagtcccaact
atagcagacgcggcattgactggcgaagtcgagaacctcaagggagtaacggagaacgta
attgttggaagcaacatcccagtcggttctggtacggttgacctcttcatgcaggtctcc
aaaaactag
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