Candidatus Nitrosotenuis sp. DW1: DSQ19_03305
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Entry
DSQ19_03305 CDS
T07741
Symbol
tfb
Name
(GenBank) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Pathway
niu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DSQ19_03305 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
niu03021
]
DSQ19_03305 (tfb)
Transcription machinery [BR:
niu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
DSQ19_03305 (tfb)
Prokaryotic type
Archaeal type
TFB
DSQ19_03305 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
HTH_AsnC-type
Zn_Ribbon_TF
ORC6_2nd
HEF_HK
Zn_Tnp_IS91
Motif
Other DBs
NCBI-ProteinID:
QLH08640
LinkDB
All DBs
Position
complement(580016..580930)
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AA seq
304 aa
AA seq
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MIMQALNIEDSCKRCKGLVLTDVTTGERCCQSCGNVIVERIEESRSAHSLFVDNQDDRSR
TGAPNSLAIHDRGLATIIGKMGKDASGKSLSVSMKNNIRRLRIWDSRSQTREHIDRNLRL
AFLELDKLKDKLTLSDTVIEKTAHIYRKAVGKGLVRGRSIQGVLGAAAYAACRDTGTPRT
LNDVSDALNIKRKDISKGYRMLVNELDLKMPVVDSINCVSKIASKVGLDEKTRRHALEIL
TNANNMEITAGKDPMGLAAAALYIACLKYDVKVSQREISIASGVTEVTIRNRYRGLRESL
DLTI
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgattatgcaagctttgaacattgaggatagttgtaaacggtgtaaaggattagtgtta
acagatgttaccacaggcgaaagatgttgtcaaagctgcggcaacgtcattgttgaacgc
attgaggaatccagatccgcacatagtttgtttgtagataatcaagatgacagaagcaga
acaggtgcaccgaattcacttgcaatacacgacagagggctggccacaataattggcaag
atgggcaaagacgcatccggtaaatcgctttcagtatccatgaaaaacaacataagaaga
cttcgaatttgggacagtagaagtcagacgcgtgagcacatagatagaaatctcagattg
gcatttctcgaattagacaaattaaaggacaaacttacattatcagatacagtaattgag
aaaacggcccatatttatcgaaaggcagttggaaaaggattagtcaggggcagatccatt
caaggcgttcttggagctgcagcgtatgcagcatgtagagacacaggaactccaagaacg
ttaaacgatgtatcagacgcacttaatataaaaagaaaagatatttcgaaaggataccgc
atgcttgtcaacgaattggatttgaagatgccagtagtggactcgataaactgtgtgtct
aaaatagcaagtaaagttggattggatgaaaaaacacgacgacatgctcttgaaatttta
acgaatgcaaacaatatggaaataacagctggaaaggatccaatgggacttgcggctgct
gcactatacatagcatgtttgaaatatgatgtcaaagtatcacaaagagaaatttcaata
gcttctggcgtaactgaagtaacaatacgaaacagatacagaggattaagagaatcgcta
gatttgactatttga
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