Candidatus Nitrosotenuis sp. DW1: DSQ19_04045
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Entry
DSQ19_04045 CDS
T07741
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Pathway
niu04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DSQ19_04045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
niu03019
]
DSQ19_04045
03009 Ribosome biogenesis [BR:
niu03009
]
DSQ19_04045
04131 Membrane trafficking [BR:
niu04131
]
DSQ19_04045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
niu04147
]
DSQ19_04045
Messenger RNA biogenesis [BR:
niu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
DSQ19_04045
Ribosome biogenesis [BR:
niu03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
DSQ19_04045
Membrane trafficking [BR:
niu04131
]
SNARE
SNARE associated proteins
Others
DSQ19_04045
Autophagy
Aggrephagy
Other aggrephagy associated proteins
DSQ19_04045
Exosome [BR:
niu04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
DSQ19_04045
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
AAA_2
CDC48_2
AAA_14
AAA_5
AAA_22
TIP49
Sigma54_activat
AAA_33
ATPase
nSTAND3
nSTAND_NTPase5
NPHP3_N
RNA_helicase
DUF815
AAA_7
NACHT
TsaE
NB-ARC
Zeta_toxin
ABC_tran
Bac_DnaA
AAA_3
AAA_24
IstB_IS21
SLFN-g3_helicase
Mg_chelatase
AAA_28
AAA_18
Parvo_NS1
AAA_17
Motif
Other DBs
NCBI-ProteinID:
QLH08762
LinkDB
All DBs
Position
complement(711830..714031)
Genome browser
AA seq
733 aa
AA seq
DB search
MTQNFTLLKVLEAYSRDVGKGIARLDYDSADSVAAATGDVLEIKGKKRTVAKCLPLYPSD
EGKGIIRIDGVTRNNLGIAIGDKVEVRKIRAVPAEKIIVAPLEAIPSIDERYLTESLENT
PLIVGDYVMVRYFGGRLTFQVIDISPAADAVIVTQKTTFVIGEKSESLQGIPHISYEDIG
GLTDEIRKVREMVELPMRHPEIFEKLGVEAPKGVLLYGVPGTGKTLLAKAVANESNAHFI
SISGPEIIGKFYGESEARLREIFKEAREKSPTIIFIDEIDSIAPKRDEVTGEVERRVVSQ
MLSLMDGLEARGKVIVIAATNRPNSLDPALRRPGRFDREIEIKVPQKKGRHEILLIHTRN
MPLADDVNLDKLASISHGYVGADLEYLCKEAAMKCLRRLLPEINLADEKISSEVLDKLIV
NADDYNNAFREIIPAGMREVYIENPDVSWNDIGGLTTVKQELQEAVEWPMKYPTFYRNLG
YRVPRGILLHGESGTGKTLLAKAVATESEANFISIRGPELLSKWLGESERGIREIFRRAR
QSSPCVVFFDEIDSIASIRGMSGDTSVTERVVSQLLTEMDGIETLYGVVVIAATNRADMI
DPALLRPGRFDRTILVPMPDKEGRKKILEISTKEIPIDKEPGLAGSKNPDYVDLEKIADS
SDGLSGADVASIANTAASIVIHEFLGKYPDPKEAEKQVNDAKVTMRHFEEALKKVKIQKD
IKIAEKIAVQYYM
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
ataacccaaaattttactttgcttaaggttttagaagcatattcacgtgatgtcggcaaa
ggaatagcacgtcttgattacgactctgcagactcggttgccgcagcgacaggcgatgtt
cttgaaatcaaaggaaagaaaagaacagtggcaaagtgtctgcccctttatccatcagac
gagggaaaaggcatcatacggattgacggcgttacaagaaacaatttgggaatcgcaatc
ggggacaaagtagaagtcagaaagataagggctgtgcctgctgagaaaatcatcgtagct
ccacttgaagcgattccctcaattgacgagagataccttacagaatcgctagaaaacacg
ccactcatagtaggagattatgtcatggtgaggtattttggaggtaggttaacctttcaa
gtaatagatatctcaccggcagcagacgcagtaatcgtaacacaaaagaccacgtttgtt
attggcgagaaaagcgagtcattgcaaggaatcccacacatatcgtatgaggacataggc
ggcctgactgatgagatacggaaagtcagagagatggtcgagctcccaatgaggcatccg
gaaatttttgaaaaacttggagttgaagcaccaaaaggcgttttgctttatggggtgcca
ggcacaggcaagacacttttggcaaaggcagtcgcaaatgaaagtaatgctcattttatc
agcatctcagggcctgagataattggcaagttttatggcgagagcgaagcaaggcttcgg
gaaattttcaaagaggcaagagaaaaatcaccaactatcattttcattgacgaaattgac
tccatagcaccaaaacgcgacgaagtcacaggagaggtagaaagaagagtagtctcacaa
atgctttcgctcatggacgggcttgaagcaagaggcaaggtaattgtcattgccgcgaca
aacaggccaaactcattggatccagcacttagaagaccggggagatttgacagggagata
gaaatcaaagtgccgcagaaaaaaggaaggcatgagatacttttgatacacacacgaaac
atgccgctggcagacgatgtcaatttggataaacttgcgtcgatcagtcacggatatgtc
ggggcagacttggaatacctctgcaaagaagcagcgatgaagtgcttgagaagactatta
cccgaaatcaatttggcagacgagaaaatttcatccgaagtgctggataagctaatagta
aatgcggatgattacaacaatgcgtttcgtgaaatcataccagctggtatgcgtgaagta
tacatagaaaatcccgatgtttcttggaacgacataggcggtctgacaacagtaaagcag
gagttacaggaagcagtagaatggccaatgaaatatccaacattctatagaaatctaggc
tacagggtacctcgtggaattttgcttcatggggaaagcggtactggaaaaacgctgttg
gcaaaagcagtggcaacagagagtgaagccaatttcatttcaattagaggtccagagcta
ttgtcaaaatggcttggagagtcagaaagaggaataagggagattttcagaagggcacga
cagtcatcaccatgcgtggtgttttttgacgaaatcgactctattgcatccatcagaggc
atgagtggagacacgtcggttacggaaagagttgtcagtcagctgttaaccgagatggac
ggaatagaaactctatacggagtagttgtgattgctgcaacaaacagggcagacatgatt
gatcctgcactcttaagaccaggcagatttgacaggaccatattagtgccaatgccagac
aaagagggtagaaagaaaatcctagagataagcacaaaggaaattccaatagacaaggaa
ccgggtttagctggaagtaaaaatccagattatgtagatttagaaaaaattgcagactcc
tcagatggactaagcggtgcagatgtggcatcaattgcaaatactgcagcgtcaattgtg
atacatgagttcctaggaaagtatccggatccaaaagaagctgagaaacaggttaacgac
gcaaaagtaacaatgagacattttgaggaagcgctaaaaaaagtgaaaatacaaaaagac
atcaagattgcagaaaaaatagcagttcagtactacatgtaa
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