Candidatus Nitrosotenuis sp. DW1: DSQ19_08945
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Entry
DSQ19_08945 CDS
T07741
Name
(GenBank) RNA helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
niu03400
]
DSQ19_08945
Enzymes [BR:
niu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSQ19_08945
DNA repair and recombination proteins [BR:
niu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
DSQ19_08945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_dom4_arc
Helicase_C
ResIII
HHH_5
DEXQc_Suv3
DNA_pol_lambd_f
HHH_2
HTH_61
Sec63
ATPase_2
ATPase
HHH
IMS_HHH_1
AAA_25
Motif
Other DBs
NCBI-ProteinID:
QLH09573
UniProt:
A0A7D5RH61
LinkDB
All DBs
Position
complement(1549736..1551862)
Genome browser
AA seq
708 aa
AA seq
DB search
MKVTDLALADSALEFLSLQGITKLYPPQEDAINAGLLEGKSILVSAPTASGKTLIAMLGI
INYLSKSKGRVIYLTPLRALASEKFSELKKLEKLDLGRSIKTAISTGDFDSVDKDAENAD
IVVLTNEKMDSLIRHGVEWLDQIGLIVADEIHLIGDTDRGPTLEVVLTKLKELENRPQIL
GLSATVTNSDEISEWLGCKLVSSEWRPVPLTEGIFDGGTILWNNGESYEIESSIRGPPVD
LSLDTIKNGGQSLIFAETRTRSASLATKGADAVSKFLSDSEKKDLEKISATLLDGNEQTD
LVKTLAALLKKGVGFHHAGLNQNCREIIENEFRNGKIKLLASTPTLAAGVNLPARRVVIS
NIARYDVKSGTNKPISVLEYKQLCGRAGRPQYDKYGEAIIVGNSNTSDLIDYYINGTPEP
IKSQLADDRALRTHILSHIVTNPGIKSEDVFDFFLKTLAGLQTRKNTLKFAIDISKRFLL
NEELIVQKGDRFAATEFGKKVSMLYIDPITAIYFKRGIETASENRNHTLGFLHLVTSSEE
FFPKFSLRNKDHEVLSTLLENHSSELIEPISEYDCSRSLLALQSWLSESSEVHLSDNLNI
ESGDMHRLVETADWLVYCLYEIAKLLGRSDLLEEIATLRKRITYGIKEELVELVQIKGIG
RIRARKLYDHGIKNLEDLHTIPTKKLAEIDKIGPIIADNIKSQLKKVR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgaccgatttggcactggcggattctgccctagagtttcttagcctgcaggga
atcaccaagttatacccacctcaggaagacgcaatcaacgcaggactgcttgagggaaaa
agtatcttggtatctgcaccaactgcaagcggaaaaacactgattgccatgcttggaatt
atcaattatttgtccaaaagcaaaggcagagtgatttaccttactccgttgagggcgctt
gcgtcggagaagttctcagagctaaaaaaactagaaaaactggatctcggcaggagtata
aagactgcaatttccaccggggattttgactctgttgacaaggatgcggaaaatgcagac
attgttgtgttgacaaatgagaaaatggactcactgattcgtcatggggtagaatggctt
gatcaaattgggcttatcgtggcagacgaaatacaccttatcggggatactgacagaggt
ccaacccttgaagtagttctcacaaaactaaaggagcttgaaaacaggcctcaaattctc
gggcttagcgcgactgtaacaaattctgatgaaatatctgagtggcttggatgcaagttg
gtctcaagtgaatggagaccagttccgctgactgaaggcatctttgatggcggaaccatt
ttgtggaacaatggggaatcgtatgaaattgaatcaagtatcagagggccgccagtggat
ctatcgcttgacaccataaaaaatggaggacagtcacttatttttgcagaaacacgaaca
cgctctgcgtcattggcaacaaagggagcagatgccgtctcaaagtttctttccgattct
gaaaaaaaggatcttgagaaaatttctgcaacattactggatggaaacgaacagacggac
ttggttaagacacttgcagcacttttaaaaaaaggagttgggtttcatcatgccggatta
aaccaaaactgtagagaaataatagaaaacgaattcagaaacggaaaaatcaaactgctt
gcctccactccaacacttgcagccggagtgaacctgcctgcaagaagggttgtaatatca
aacattgcaagatatgatgtaaagtctggcacaaacaagccgatcagtgttttagagtac
aagcagctctgcggaagagcgggcagaccgcagtatgacaagtatggtgaggcaataatt
gttggaaattcaaatacgtctgatctgattgattattacatcaatggaacgcctgagcca
atcaagtcgcagcttgccgatgatcgtgcactgcgaactcatattcttagccacatagta
acaaaccctggaataaaaagcgaagatgtttttgattttttcctaaagacattggcaggc
ttgcaaacaagaaaaaatacactcaagttcgcaatagatatctccaaaagatttttgcta
aatgaagaactcatagtacaaaaaggagacagatttgccgcaacagaatttggcaaaaaa
gtctccatgctgtacattgatccaataactgcaatttactttaagcgaggaatagagaca
gcatcagaaaacagaaaccatacactgggatttttacatctagttacaagttcggaggag
tttttcccaaaattctcgctaagaaacaaggatcacgaagttcttagcacattgcttgaa
aatcattcctcggaactaatagagccgatatccgaatacgactgctcgcgaagtcttctt
gccctacagtcatggttaagcgagtcgtctgaggttcatctatctgataacctaaacatt
gagtcaggagacatgcataggctggtagagactgcagactggcttgtctactgcctttat
gagattgcaaagttgcttgggcggtcagatctattggaagaaatcgccacgctgcgaaaa
agaatcacatacggcataaaagaggaactcgtcgagcttgtccagatcaaaggaattggg
cgaattcgtgcaagaaaactatatgatcacggtatcaagaatctcgaagatctgcacacg
attccgacaaaaaaacttgcagaaatagacaaaattggtccgataattgcagataatatt
aaatcccaattgaaaaaagttaggtaa
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