Candidatus Nitrosotenuis sp. DW1: DSQ19_10495
Help
Entry
DSQ19_10495 CDS
T07741
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
niu
Candidatus Nitrosotenuis sp. DW1
Pathway
niu00260
Glycine, serine and threonine metabolism
niu00630
Glyoxylate and dicarboxylate metabolism
niu00670
One carbon pool by folate
niu00680
Methane metabolism
niu01100
Metabolic pathways
niu01110
Biosynthesis of secondary metabolites
niu01120
Microbial metabolism in diverse environments
niu01200
Carbon metabolism
niu01230
Biosynthesis of amino acids
niu01240
Biosynthesis of cofactors
niu04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
niu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DSQ19_10495
09102 Energy metabolism
00680 Methane metabolism
DSQ19_10495
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DSQ19_10495
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DSQ19_10495
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DSQ19_10495
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DSQ19_10495
Enzymes [BR:
niu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DSQ19_10495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Pyridoxal_deC
SelA
Motif
Other DBs
NCBI-ProteinID:
QLH09831
UniProt:
A0A7D5RH19
LinkDB
All DBs
Position
1827303..1828625
Genome browser
AA seq
440 aa
AA seq
DB search
MAKTSNRDSYKKILSSLQTHNKWFENSIPLIASENIPSPAVKEALLSDFGNRYAEGWPGE
RVYAGCIYIDEVEFECMALAKKLFKAEFADVRPISGVVANLAIYSAFTNPGDIMIAPSIP
AGGHISHGKKEHSGTAGLVHGLDVEFYPFDAEEMTIDVDKTKDKIEELQKTGRLPKMAMF
GGSLFLFPHPVKELADFMKSHNIYINYDAAHVAGLIAGGQFQDPLREGADSMTMSTHKTL
FGPQGGLVLASAKYGEAIKKATFPGLTSSHHIHHMAAKAITFTEALEFGKDYAKQVIKNA
KILAEALSENGFKVLGEKRGFTESHQIAVNVLDYSDGGKVEADLEKANIIVNRQLIPGDI
KAGRNYFHPGGIRLGVAEITRLGMKGSEMKEIASFIKKIVIDKKDPKKMVSAIKKFRKDY
QKVHYCFDNKLGAYEYVKLR
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagacctcaaatcgagactcttacaagaaaattctatcgagtcttcagactcac
aacaagtggtttgagaactctattccactaatagcaagcgaaaacattccaagcccagcc
gtaaaagaggcgttgctttcagactttggaaacagatatgcagaaggctggcccggcgag
cgcgtttatgcaggctgcatctacattgacgaggtcgaatttgagtgcatggcacttgca
aaaaaactcttcaaggcagagtttgctgacgtaagaccaatttctggcgttgtggcaaac
cttgcaatttattctgcttttaccaatcctggagacatcatgattgcaccgtcaattcct
gcaggcggccacatttcccatggcaaaaaggagcactccggaaccgcaggactggtacac
ggacttgatgttgaattctatccattcgatgccgaggaaatgacaatcgatgtagataaa
accaaagacaagattgaagagctccaaaaaacaggaaggcttcccaagatggcaatgttt
ggaggctcgttgtttttgtttccacatccagtaaaggagcttgccgattttatgaaaagc
cataatatttacatcaattatgatgcggcacatgtagcaggtctgattgcaggaggccag
ttccaagatcctttaagggagggggcagacagcatgacgatgagtacacacaagactctg
tttggccctcagggcggcctagtcctggcatctgcaaaatacggcgaggcaataaaaaag
gcaacgtttcctggtcttacgagcagccatcacattcatcacatggcagcaaaggcaatt
acctttacagaagcattagagtttggcaaggattacgcaaaacaggtaataaagaatgca
aaaatcttggcagaggctttgagtgaaaacgggttcaaggttttgggagaaaaacgcggg
ttcacggaatctcaccagattgcggtaaacgttcttgattacagtgacggtggaaaggta
gaggcagacttggaaaaggcaaacattatcgtaaacaggcagctgatcccaggcgacatc
aaggcaggaagaaactatttccatccaggcggaatcaggctaggcgttgcagagataaca
agacttggcatgaagggatccgaaatgaaagagattgcatcgtttatcaaaaaaattgtt
attgacaaaaaggatccaaagaaaatggtatcagctatcaagaaattcagaaaggattac
caaaaggtgcattactgctttgacaacaagcttggcgcctacgaatacgtaaagctcaga
tag
DBGET
integrated database retrieval system